Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 BTBD7P1-201ENST00000447253 1453 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AC114501.2-201ENST00000439631 535 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AC009477.1-201ENST00000452936 217 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AC092183.1-201ENST00000469884 875 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 MEIS3P1-201ENST00000495167 958 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AC093214.1-201ENST00000511688 1107 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 DUX4L47-201ENST00000566374 394 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AC092337.1-201ENST00000568699 1129 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 KRT8P35-201ENST00000483942 1338 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 MRPL37P1-201ENST00000592451 1337 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 AC022144.1-201ENST00000602255 1580 ntBASIC11.53□□□□□ -0.56
FAM78BQ5VT40 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
FAM78BQ5VT40 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 AC072061.1-201ENST00000569710 2234 ntBASIC11.52□□□□□ -0.56
FAM78BQ5VT40 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
FAM78BQ5VT40 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 TLE1P1-201ENST00000422965 589 ntBASIC11.52□□□□□ -0.57
FAM78BQ5VT40 BASP1P1-201ENST00000430708 665 ntBASIC11.52□□□□□ -0.57
FAM78BQ5VT40 AC026410.3-201ENST00000514280 936 ntBASIC11.52□□□□□ -0.57
FAM78BQ5VT40 AC135586.1-201ENST00000539323 574 ntBASIC11.52□□□□□ -0.57
FAM78BQ5VT40 BX539320.1-201ENST00000623759 877 ntBASIC11.52□□□□□ -0.57
FAM78BQ5VT40 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms