Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 MIR4746-201ENST00000579802 71 ntBASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 CLPP-205ENST00000596605 646 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AP001002.2-201ENST00000625137 386 ntBASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AC023090.2-201ENST00000625182 2110 ntBASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AC090616.6-203ENST00000579186 1945 ntBASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AC105250.1-201ENST00000509378 2057 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 ODCP-201ENST00000459650 1639 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 AC091951.1-201ENST00000512854 2465 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 AC022080.1-201ENST00000366255 781 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 RPL18AP15-201ENST00000430258 517 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 POLR2LP1-206ENST00000444785 187 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 AC008494.1-201ENST00000497612 796 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 AL009176.1-201ENST00000607876 650 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 AC079331.1-201ENST00000623200 1200 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 AC126177.1-201ENST00000547829 2218 ntBASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RSPO4Q2I0M5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC068418.2-201ENST00000577309 3703 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC019109.1-201ENST00000401725 1874 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms