Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.41□□□□□ -0.42
AP3S2P59780 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.41□□□□□ -0.42
AP3S2P59780 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.41□□□□□ -0.42
AP3S2P59780 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.41□□□□□ -0.42
AP3S2P59780 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 SDHAP3-202ENST00000515467 728 ntBASIC12.41□□□□□ -0.42
AP3S2P59780 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.41□□□□□ -0.42
AP3S2P59780 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 TIMM17BP1-201ENST00000545713 516 ntBASIC12.41□□□□□ -0.42
AP3S2P59780 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.41□□□□□ -0.42
AP3S2P59780 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
AP3S2P59780 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 AL928654.5-201ENST00000624831 2501 ntBASIC12.41□□□□□ -0.42
AP3S2P59780 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 AC090114.2-201ENST00000608477 7054 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 AL022313.4-201ENST00000562756 2046 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 FAM95B1-212ENST00000592873 4692 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 AL139094.1-201ENST00000405549 1188 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 AL591424.1-201ENST00000442569 1213 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 FAAHP1-202ENST00000446499 1238 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 AC026434.2-201ENST00000506094 1078 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 GCOM2-201ENST00000509133 1104 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.4□□□□□ -0.42
AP3S2P59780 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.4□□□□□ -0.42
AP3S2P59780 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
AP3S2P59780 PRSS30P-206ENST00000641773 873 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 PCDHA6-201ENST00000378126 3267 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 VENTXP1-201ENST00000569334 2716 ntBASIC12.4□□□□□ -0.42
AP3S2P59780 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.4□□□□□ -0.42
AP3S2P59780 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
AP3S2P59780 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP3S2P59780 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms