Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LIMK2P53671 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.55□□□□□ -0.08
LIMK2P53671 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.55□□□□□ -0.08
LIMK2P53671 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.55□□□□□ -0.08
LIMK2P53671 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.55□□□□□ -0.08
LIMK2P53671 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.55□□□□□ -0.08
LIMK2P53671 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.55□□□□□ -0.08
LIMK2P53671 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.55□□□□□ -0.08
LIMK2P53671 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.55□□□□□ -0.08
LIMK2P53671 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 SCARNA20.5-201ENST00000516991 142 ntBASIC14.55□□□□□ -0.08
LIMK2P53671 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.55□□□□□ -0.08
LIMK2P53671 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.55□□□□□ -0.08
LIMK2P53671 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.55□□□□□ -0.08
LIMK2P53671 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.55□□□□□ -0.08
LIMK2P53671 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.55□□□□□ -0.08
LIMK2P53671 AC073413.1-201ENST00000603927 732 ntBASIC14.55□□□□□ -0.08
LIMK2P53671 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.55□□□□□ -0.08
LIMK2P53671 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LIMK2P53671 AC002472.3-201ENST00000640124 621 ntBASIC14.55□□□□□ -0.08
LIMK2P53671 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 AC138028.6-201ENST00000616106 1482 ntBASIC14.55□□□□□ -0.08
LIMK2P53671 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.55□□□□□ -0.08
LIMK2P53671 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.55□□□□□ -0.08
LIMK2P53671 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.55□□□□□ -0.08
LIMK2P53671 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.55□□□□□ -0.08
LIMK2P53671 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LIMK2P53671 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.54□□□□□ -0.08
LIMK2P53671 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.54□□□□□ -0.08
LIMK2P53671 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.54□□□□□ -0.08
LIMK2P53671 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.54□□□□□ -0.08
LIMK2P53671 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LIMK2P53671 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LIMK2P53671 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.54□□□□□ -0.08
LIMK2P53671 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LIMK2P53671 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.54□□□□□ -0.08
LIMK2P53671 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.54□□□□□ -0.08
LIMK2P53671 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.54□□□□□ -0.08
LIMK2P53671 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.54□□□□□ -0.08
LIMK2P53671 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.54□□□□□ -0.08
LIMK2P53671 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.54□□□□□ -0.08
LIMK2P53671 AC020914.3-201ENST00000594712 304 ntBASIC14.54□□□□□ -0.08
LIMK2P53671 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.54□□□□□ -0.08
LIMK2P53671 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
LIMK2P53671 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.54□□□□□ -0.08
LIMK2P53671 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 AC018735.1-201ENST00000437208 1502 ntBASIC14.54□□□□□ -0.08
LIMK2P53671 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.54□□□□□ -0.08
LIMK2P53671 AC073548.1-201ENST00000624088 1882 ntBASIC14.54□□□□□ -0.08
LIMK2P53671 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.54□□□□□ -0.08
LIMK2P53671 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.54□□□□□ -0.08
LIMK2P53671 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 AC015909.5-201ENST00000624336 2266 ntBASIC14.54□□□□□ -0.08
LIMK2P53671 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.54□□□□□ -0.08
LIMK2P53671 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.54□□□□□ -0.08
LIMK2P53671 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIMK2P53671 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LIMK2P53671 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.54□□□□□ -0.08
LIMK2P53671 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms