Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
BRCA2P51587 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 AGAP7P-201ENST00000582299 2062 ntBASIC15.53■□□□□ 0.08
BRCA2P51587 AGAP14-201ENST00000624701 2060 ntBASIC15.53■□□□□ 0.08
BRCA2P51587 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC15.53■□□□□ 0.08
BRCA2P51587 MIR6165-201ENST00000614803 84 ntBASIC15.53■□□□□ 0.08
BRCA2P51587 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
BRCA2P51587 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC15.53■□□□□ 0.08
BRCA2P51587 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.53■□□□□ 0.08
BRCA2P51587 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC15.53■□□□□ 0.08
BRCA2P51587 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
BRCA2P51587 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.53■□□□□ 0.08
BRCA2P51587 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC15.53■□□□□ 0.08
BRCA2P51587 AC123912.6-201ENST00000612657 315 ntBASIC15.53■□□□□ 0.08
BRCA2P51587 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
BRCA2P51587 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRCA2P51587 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
BRCA2P51587 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BRCA2P51587 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.52■□□□□ 0.08
BRCA2P51587 HSD3BP1-201ENST00000286193 1111 ntBASIC15.52■□□□□ 0.08
BRCA2P51587 MIR632-201ENST00000385193 94 ntBASIC15.52■□□□□ 0.08
BRCA2P51587 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.52■□□□□ 0.08
BRCA2P51587 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRCA2P51587 AC104506.1-201ENST00000609247 429 ntBASIC15.52■□□□□ 0.08
BRCA2P51587 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.52■□□□□ 0.08
BRCA2P51587 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRCA2P51587 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRCA2P51587 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.52■□□□□ 0.08
BRCA2P51587 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRCA2P51587 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.52■□□□□ 0.08
BRCA2P51587 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BRCA2P51587 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC15.52■□□□□ 0.07
BRCA2P51587 RPSAP70-201ENST00000504462 864 ntBASIC15.52■□□□□ 0.07
BRCA2P51587 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC15.52■□□□□ 0.07
BRCA2P51587 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC15.52■□□□□ 0.07
BRCA2P51587 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRCA2P51587 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRCA2P51587 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.52■□□□□ 0.07
BRCA2P51587 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRCA2P51587 LILRP2-202ENST00000413572 1383 ntBASIC15.52■□□□□ 0.07
BRCA2P51587 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BRCA2P51587 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BRCA2P51587 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.52■□□□□ 0.07
BRCA2P51587 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.52■□□□□ 0.07
BRCA2P51587 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.07
BRCA2P51587 NAT9-204ENST00000578822 839 ntTSL 3 BASIC15.52■□□□□ 0.07
BRCA2P51587 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
BRCA2P51587 AC009812.1-201ENST00000605948 1059 ntBASIC15.52■□□□□ 0.07
BRCA2P51587 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.52■□□□□ 0.07
BRCA2P51587 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BRCA2P51587 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
BRCA2P51587 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BRCA2P51587 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.52■□□□□ 0.07
BRCA2P51587 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.52■□□□□ 0.07
BRCA2P51587 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BRCA2P51587 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
BRCA2P51587 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCA2P51587 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.51■□□□□ 0.07
BRCA2P51587 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.51■□□□□ 0.07
BRCA2P51587 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC15.51■□□□□ 0.07
BRCA2P51587 HNRNPA1P72-201ENST00000529511 967 ntBASIC15.51■□□□□ 0.07
BRCA2P51587 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BRCA2P51587 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
BRCA2P51587 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.51■□□□□ 0.07
BRCA2P51587 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCA2P51587 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC15.51■□□□□ 0.07
BRCA2P51587 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
BRCA2P51587 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCA2P51587 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCA2P51587 AC015813.5-201ENST00000624641 1514 ntBASIC15.51■□□□□ 0.07
BRCA2P51587 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRCA2P51587 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.51■□□□□ 0.07
BRCA2P51587 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.51■□□□□ 0.07
BRCA2P51587 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC15.51■□□□□ 0.07
BRCA2P51587 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCA2P51587 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.51■□□□□ 0.07
BRCA2P51587 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRCA2P51587 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.51■□□□□ 0.07
BRCA2P51587 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
BRCA2P51587 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
BRCA2P51587 SOD1-202ENST00000389995 865 ntTSL 3 BASIC15.5■□□□□ 0.07
BRCA2P51587 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRCA2P51587 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.5■□□□□ 0.07
BRCA2P51587 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.5■□□□□ 0.07
BRCA2P51587 NEMF-210ENST00000556672 590 ntTSL 2 BASIC15.5■□□□□ 0.07
BRCA2P51587 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
BRCA2P51587 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRCA2P51587 RN7SL832P-201ENST00000607781 1756 ntBASIC15.5■□□□□ 0.07
BRCA2P51587 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
BRCA2P51587 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms