Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBP50607 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TUBP50607 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TUBP50607 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBP50607 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBP50607 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBP50607 AL353637.1-201ENST00000451571 732 ntBASIC15.21■□□□□ 0.03
TUBP50607 UPF3AP2-201ENST00000457924 1132 ntBASIC15.21■□□□□ 0.03
TUBP50607 RN7SL769P-201ENST00000469386 295 ntBASIC15.21■□□□□ 0.03
TUBP50607 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 AC022447.6-201ENST00000515522 438 ntBASIC15.21■□□□□ 0.03
TUBP50607 AC245884.6-201ENST00000515672 1067 ntBASIC15.21■□□□□ 0.03
TUBP50607 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.21■□□□□ 0.03
TUBP50607 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.21■□□□□ 0.03
TUBP50607 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBP50607 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.21■□□□□ 0.03
TUBP50607 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
TUBP50607 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.21■□□□□ 0.03
TUBP50607 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TUBP50607 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 TCAF1P1-201ENST00000414990 2232 ntBASIC15.21■□□□□ 0.03
TUBP50607 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBP50607 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBP50607 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBP50607 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBP50607 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TUBP50607 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBP50607 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBP50607 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.21■□□□□ 0.02
TUBP50607 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBP50607 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 AC239868.1-201ENST00000369385 493 ntBASIC15.2■□□□□ 0.02
TUBP50607 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 RN7SL720P-201ENST00000488178 304 ntBASIC15.2■□□□□ 0.02
TUBP50607 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.2■□□□□ 0.02
TUBP50607 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.2■□□□□ 0.02
TUBP50607 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.2■□□□□ 0.02
TUBP50607 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.2■□□□□ 0.02
TUBP50607 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.2■□□□□ 0.02
TUBP50607 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 AC018629.1-201ENST00000623381 1736 ntBASIC15.2■□□□□ 0.02
TUBP50607 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TUBP50607 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBP50607 AP001267.2-201ENST00000532619 2086 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms