Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LHX2P50458 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LHX2P50458 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LHX2P50458 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LHX2P50458 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
LHX2P50458 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.79□□□□□ -0.36
LHX2P50458 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.79□□□□□ -0.36
LHX2P50458 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.79□□□□□ -0.36
LHX2P50458 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 MIR645-201ENST00000385283 94 ntBASIC12.79□□□□□ -0.36
LHX2P50458 AC103592.1-201ENST00000394513 664 ntBASIC12.79□□□□□ -0.36
LHX2P50458 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.79□□□□□ -0.36
LHX2P50458 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.79□□□□□ -0.36
LHX2P50458 KRT18P15-201ENST00000458108 1291 ntBASIC12.79□□□□□ -0.36
LHX2P50458 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.79□□□□□ -0.36
LHX2P50458 NDUFS6P1-201ENST00000485187 316 ntBASIC12.79□□□□□ -0.36
LHX2P50458 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.79□□□□□ -0.36
LHX2P50458 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.79□□□□□ -0.36
LHX2P50458 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 AC103810.10-201ENST00000606504 343 ntBASIC12.79□□□□□ -0.36
LHX2P50458 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LHX2P50458 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.79□□□□□ -0.36
LHX2P50458 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 AC026748.1-201ENST00000624349 3251 ntBASIC12.79□□□□□ -0.36
LHX2P50458 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 SHMT1P1-201ENST00000419974 1312 ntBASIC12.79□□□□□ -0.36
LHX2P50458 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
LHX2P50458 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LHX2P50458 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 AC139749.1-202ENST00000617529 3139 ntBASIC12.79□□□□□ -0.36
LHX2P50458 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.79□□□□□ -0.36
LHX2P50458 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LHX2P50458 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LHX2P50458 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LHX2P50458 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LHX2P50458 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.78□□□□□ -0.36
LHX2P50458 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.78□□□□□ -0.36
LHX2P50458 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LHX2P50458 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.78□□□□□ -0.36
LHX2P50458 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.78□□□□□ -0.36
LHX2P50458 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.78□□□□□ -0.36
LHX2P50458 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LHX2P50458 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.78□□□□□ -0.36
LHX2P50458 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LHX2P50458 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LHX2P50458 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LHX2P50458 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms