Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASP4P49662 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CASP4P49662 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.67■□□□□ 0.1
CASP4P49662 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.67■□□□□ 0.1
CASP4P49662 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.67■□□□□ 0.1
CASP4P49662 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.67■□□□□ 0.1
CASP4P49662 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.67■□□□□ 0.1
CASP4P49662 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.67■□□□□ 0.1
CASP4P49662 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CASP4P49662 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP4P49662 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.67■□□□□ 0.1
CASP4P49662 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP4P49662 MIR6869-201ENST00000619434 62 ntBASIC15.67■□□□□ 0.1
CASP4P49662 AL591471.1-201ENST00000621855 229 ntBASIC15.67■□□□□ 0.1
CASP4P49662 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CASP4P49662 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.67■□□□□ 0.1
CASP4P49662 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 AHCYP4-201ENST00000419201 1315 ntBASIC15.67■□□□□ 0.1
CASP4P49662 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 FAM90A12P-201ENST00000519497 2375 ntBASIC15.67■□□□□ 0.1
CASP4P49662 FAM90A24P-201ENST00000520792 2369 ntBASIC15.67■□□□□ 0.1
CASP4P49662 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 MIR600HG-201ENST00000449175 5984 ntBASIC15.66■□□□□ 0.1
CASP4P49662 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CASP4P49662 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.66■□□□□ 0.1
CASP4P49662 AC009779.1-201ENST00000551138 283 ntBASIC15.66■□□□□ 0.1
CASP4P49662 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 ST20-AS1-201ENST00000560255 4223 ntBASIC15.66■□□□□ 0.1
CASP4P49662 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.66■□□□□ 0.1
CASP4P49662 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CASP4P49662 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 AC072061.1-201ENST00000569710 2234 ntBASIC15.66■□□□□ 0.1
CASP4P49662 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP4P49662 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.65■□□□□ 0.1
CASP4P49662 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CASP4P49662 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.65■□□□□ 0.1
CASP4P49662 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.65■□□□□ 0.1
CASP4P49662 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CASP4P49662 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP4P49662 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CASP4P49662 AC078875.1-201ENST00000431907 724 ntBASIC15.65■□□□□ 0.1
CASP4P49662 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.65■□□□□ 0.1
CASP4P49662 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.65■□□□□ 0.1
CASP4P49662 AC005740.2-201ENST00000511085 419 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms