Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AC006122.1-201ENST00000493323 440 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AL583810.1-201ENST00000553344 1045 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AC005730.2-201ENST00000564549 1184 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AC008805.1-201ENST00000590892 364 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AL359881.2-201ENST00000602973 570 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 AL096828.3-201ENST00000615354 462 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 AL023803.2-201ENST00000620080 638 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AC144522.1-201ENST00000625111 1658 ntBASIC12.85□□□□□ -0.35
CSNK1A1P48729 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 CICP16-201ENST00000502609 2813 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 MIR193BHG-211ENST00000641433 5365 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 REXO1L6P-201ENST00000603433 1515 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 USP17L6P-201ENST00000382470 1197 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 GOLGA2P4-201ENST00000441462 777 ntBASIC12.84□□□□□ -0.35
CSNK1A1P48729 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSNK1A1P48729 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.84□□□□□ -0.35
CSNK1A1P48729 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms