Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 POLD2P1-201ENST00000511220 997 ntBASIC12.51□□□□□ -0.41
CBX5P45973 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.51□□□□□ -0.41
CBX5P45973 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 MIR497HG-202ENST00000572453 3838 ntBASIC12.51□□□□□ -0.41
CBX5P45973 MIR3687-2-201ENST00000577708 61 ntBASIC12.51□□□□□ -0.41
CBX5P45973 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.51□□□□□ -0.41
CBX5P45973 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.51□□□□□ -0.41
CBX5P45973 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.51□□□□□ -0.41
CBX5P45973 MIR3687-1-201ENST00000614492 61 ntBASIC12.51□□□□□ -0.41
CBX5P45973 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.51□□□□□ -0.41
CBX5P45973 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 AC011481.3-201ENST00000623895 5594 ntBASIC12.51□□□□□ -0.41
CBX5P45973 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CBX5P45973 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CBX5P45973 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CBX5P45973 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CBX5P45973 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 AL139400.1-201ENST00000366220 510 ntBASIC12.5□□□□□ -0.41
CBX5P45973 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.5□□□□□ -0.41
CBX5P45973 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.5□□□□□ -0.41
CBX5P45973 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CBX5P45973 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.5□□□□□ -0.41
CBX5P45973 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.5□□□□□ -0.41
CBX5P45973 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 AC092865.5-201ENST00000545435 363 ntBASIC12.5□□□□□ -0.41
CBX5P45973 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.5□□□□□ -0.41
CBX5P45973 AL049840.4-201ENST00000602422 811 ntBASIC12.5□□□□□ -0.41
CBX5P45973 AL391069.4-201ENST00000609583 481 ntBASIC12.5□□□□□ -0.41
CBX5P45973 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.5□□□□□ -0.41
CBX5P45973 TUBB8P4-201ENST00000511806 1324 ntBASIC12.5□□□□□ -0.41
CBX5P45973 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 AC003102.2-201ENST00000589195 1469 ntBASIC12.5□□□□□ -0.41
CBX5P45973 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.5□□□□□ -0.41
CBX5P45973 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CBX5P45973 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms