Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 AGAP12P-201ENST00000585227 2359 ntBASIC12.62□□□□□ -0.39
GDNFP39905 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.62□□□□□ -0.39
GDNFP39905 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.62□□□□□ -0.39
GDNFP39905 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.62□□□□□ -0.39
GDNFP39905 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 AC190387.1-201ENST00000551683 408 ntBASIC12.62□□□□□ -0.39
GDNFP39905 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.62□□□□□ -0.39
GDNFP39905 AC008494.3-201ENST00000606615 944 ntBASIC12.62□□□□□ -0.39
GDNFP39905 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.62□□□□□ -0.39
GDNFP39905 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.62□□□□□ -0.39
GDNFP39905 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GDNFP39905 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
GDNFP39905 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
GDNFP39905 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
GDNFP39905 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
GDNFP39905 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.61□□□□□ -0.39
GDNFP39905 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
GDNFP39905 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.61□□□□□ -0.39
GDNFP39905 AL138799.1-201ENST00000448213 1675 ntBASIC12.61□□□□□ -0.39
GDNFP39905 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
GDNFP39905 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GDNFP39905 MKRN5P-201ENST00000445263 1467 ntBASIC12.61□□□□□ -0.39
GDNFP39905 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
GDNFP39905 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 INTS4P2-202ENST00000614726 2019 ntBASIC12.61□□□□□ -0.39
GDNFP39905 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.61□□□□□ -0.39
GDNFP39905 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
GDNFP39905 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.61□□□□□ -0.39
GDNFP39905 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 MYCLP2-201ENST00000449268 967 ntBASIC12.61□□□□□ -0.39
GDNFP39905 ELK1P1-201ENST00000485699 580 ntBASIC12.61□□□□□ -0.39
GDNFP39905 AC104596.2-201ENST00000512793 793 ntBASIC12.61□□□□□ -0.39
GDNFP39905 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.61□□□□□ -0.39
GDNFP39905 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.61□□□□□ -0.39
GDNFP39905 AC092552.1-201ENST00000547243 906 ntBASIC12.61□□□□□ -0.39
GDNFP39905 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC12.61□□□□□ -0.39
GDNFP39905 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.61□□□□□ -0.39
GDNFP39905 AL359711.2-201ENST00000563105 872 ntBASIC12.61□□□□□ -0.39
GDNFP39905 AC120045.2-201ENST00000567334 178 ntBASIC12.61□□□□□ -0.39
GDNFP39905 CTBP2P3-201ENST00000585629 1255 ntBASIC12.61□□□□□ -0.39
GDNFP39905 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.61□□□□□ -0.39
GDNFP39905 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
GDNFP39905 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GDNFP39905 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.61□□□□□ -0.39
GDNFP39905 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms