Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHMLP26374 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMLP26374 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMLP26374 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHMLP26374 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMLP26374 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHMLP26374 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMLP26374 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMLP26374 FAM8A2P-201ENST00000528813 1142 ntBASIC17.28■□□□□ 0.36
CHMLP26374 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMLP26374 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMLP26374 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 RN7SL163P-201ENST00000583100 276 ntBASIC17.28■□□□□ 0.36
CHMLP26374 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.28■□□□□ 0.36
CHMLP26374 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 LINC01815-202ENST00000641468 1409 ntBASIC17.28■□□□□ 0.36
CHMLP26374 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 NFIC-211ENST00000641145 8399 ntBASIC17.28■□□□□ 0.36
CHMLP26374 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHMLP26374 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMLP26374 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHMLP26374 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMLP26374 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CHMLP26374 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMLP26374 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMLP26374 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHMLP26374 MARK2P9-201ENST00000430958 1727 ntBASIC17.27■□□□□ 0.36
CHMLP26374 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMLP26374 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 RCC2P1-201ENST00000452257 1476 ntBASIC17.27■□□□□ 0.36
CHMLP26374 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.27■□□□□ 0.36
CHMLP26374 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CHMLP26374 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.27■□□□□ 0.36
CHMLP26374 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.27■□□□□ 0.36
CHMLP26374 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMLP26374 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.27■□□□□ 0.36
CHMLP26374 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMLP26374 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMLP26374 AC009779.1-201ENST00000551138 283 ntBASIC17.27■□□□□ 0.36
CHMLP26374 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMLP26374 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.27■□□□□ 0.36
CHMLP26374 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMLP26374 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMLP26374 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMLP26374 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMLP26374 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.27■□□□□ 0.35
CHMLP26374 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMLP26374 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CHMLP26374 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMLP26374 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMLP26374 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMLP26374 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms