Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC005586.2-201ENST00000563946 837 ntBASIC12.18□□□□□ -0.46
COL8A2P25067 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.18□□□□□ -0.46
COL8A2P25067 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
COL8A2P25067 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
COL8A2P25067 LINC01783-202ENST00000614408 828 ntBASIC12.18□□□□□ -0.46
COL8A2P25067 BX284668.2-205ENST00000619677 828 ntBASIC12.18□□□□□ -0.46
COL8A2P25067 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
COL8A2P25067 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 RNA5SP359-201ENST00000364838 113 ntBASIC12.17□□□□□ -0.46
COL8A2P25067 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.17□□□□□ -0.46
COL8A2P25067 AL627231.1-201ENST00000394467 1125 ntBASIC12.17□□□□□ -0.46
COL8A2P25067 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 BANF1P3-201ENST00000412556 261 ntBASIC12.17□□□□□ -0.46
COL8A2P25067 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 AC022447.6-201ENST00000515522 438 ntBASIC12.17□□□□□ -0.46
COL8A2P25067 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.17□□□□□ -0.46
COL8A2P25067 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 AP002353.1-201ENST00000528257 1599 ntBASIC12.17□□□□□ -0.46
COL8A2P25067 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.17□□□□□ -0.46
COL8A2P25067 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
COL8A2P25067 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
COL8A2P25067 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms