Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 BEND3P3-201ENST00000611030 2440 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 TRIM80P-201ENST00000455685 2848 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PRKCAP17252 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.45□□□□□ -0.26
PRKCAP17252 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.45□□□□□ -0.26
PRKCAP17252 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 AC099336.1-201ENST00000417053 1171 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.45□□□□□ -0.26
PRKCAP17252 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.45□□□□□ -0.26
PRKCAP17252 HLA-V-201ENST00000429037 534 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 PUDPP3-201ENST00000445368 636 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 AL355994.2-201ENST00000447882 704 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 CSF2RBP1-201ENST00000447905 391 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 KRT223P-202ENST00000449164 1292 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.45□□□□□ -0.26
PRKCAP17252 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.45□□□□□ -0.26
PRKCAP17252 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.45□□□□□ -0.26
PRKCAP17252 MIR6805-201ENST00000615055 62 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 AP001002.3-201ENST00000623482 206 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 COX11-210ENST00000639671 696 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.45□□□□□ -0.26
PRKCAP17252 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PRKCAP17252 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.45□□□□□ -0.26
PRKCAP17252 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PRKCAP17252 AC015802.1-201ENST00000588104 1449 ntBASIC13.45□□□□□ -0.26
PRKCAP17252 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.45□□□□□ -0.26
PRKCAP17252 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PRKCAP17252 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
PRKCAP17252 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
PRKCAP17252 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
PRKCAP17252 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.44□□□□□ -0.26
PRKCAP17252 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.44□□□□□ -0.26
PRKCAP17252 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
PRKCAP17252 MIR658-201ENST00000385210 100 ntBASIC13.44□□□□□ -0.26
PRKCAP17252 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.44□□□□□ -0.26
PRKCAP17252 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.44□□□□□ -0.26
PRKCAP17252 HOMER2P2-201ENST00000451621 847 ntBASIC13.44□□□□□ -0.26
PRKCAP17252 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.44□□□□□ -0.26
PRKCAP17252 AP006547.1-201ENST00000563435 692 ntBASIC13.44□□□□□ -0.26
PRKCAP17252 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.44□□□□□ -0.26
PRKCAP17252 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.44□□□□□ -0.26
PRKCAP17252 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.44□□□□□ -0.26
PRKCAP17252 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PRKCAP17252 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms