Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 MIR3188-201ENST00000583494 85 ntBASIC15.98■□□□□ 0.15
ATP2A2P16615 FO393412.1-201ENST00000619841 382 ntBASIC15.98■□□□□ 0.15
ATP2A2P16615 AC133540.1-201ENST00000620845 1019 ntBASIC15.98■□□□□ 0.15
ATP2A2P16615 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.98■□□□□ 0.15
ATP2A2P16615 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP2A2P16615 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.98■□□□□ 0.15
ATP2A2P16615 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP2A2P16615 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATP2A2P16615 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP2A2P16615 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP2A2P16615 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.98■□□□□ 0.15
ATP2A2P16615 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP2A2P16615 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.98■□□□□ 0.15
ATP2A2P16615 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATP2A2P16615 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATP2A2P16615 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP2A2P16615 FGD5P1-202ENST00000614866 2498 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATP2A2P16615 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
ATP2A2P16615 CICP11-201ENST00000434745 2827 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 CYP4F23P-201ENST00000593402 1579 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP2A2P16615 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATP2A2P16615 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
ATP2A2P16615 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.97■□□□□ 0.15
ATP2A2P16615 ALG3P1-201ENST00000508806 1114 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 C2orf69P1-201ENST00000563532 1093 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.97■□□□□ 0.15
ATP2A2P16615 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.97■□□□□ 0.15
ATP2A2P16615 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 NUDT4P2-201ENST00000578341 546 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP2A2P16615 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.97■□□□□ 0.15
ATP2A2P16615 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ATP2A2P16615 AC005618.3-201ENST00000624928 458 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 AC126335.2-201ENST00000623362 4637 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP2A2P16615 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
ATP2A2P16615 ZBED1P1-201ENST00000502364 1930 ntBASIC15.97■□□□□ 0.15
ATP2A2P16615 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ATP2A2P16615 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ATP2A2P16615 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
ATP2A2P16615 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.97■□□□□ 0.15
ATP2A2P16615 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP2A2P16615 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP2A2P16615 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATP2A2P16615 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2A2P16615 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP2A2P16615 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ATP2A2P16615 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2A2P16615 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2A2P16615 REXO1L4P-201ENST00000605109 1937 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ATP2A2P16615 AL390755.1-201ENST00000623716 2027 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2A2P16615 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP2A2P16615 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP2A2P16615 HIST2H2BA-201ENST00000412169 381 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2A2P16615 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2A2P16615 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2A2P16615 AL645933.1-201ENST00000440087 609 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP2A2P16615 AL035414.1-201ENST00000451327 857 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP2A2P16615 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP2A2P16615 RN7SL81P-201ENST00000493781 261 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 ALG1L6P-201ENST00000515248 758 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP2A2P16615 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP2A2P16615 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATP2A2P16615 AL022344.2-201ENST00000568976 968 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP2A2P16615 AC025262.2-201ENST00000623975 1056 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP2A2P16615 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP2A2P16615 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP2A2P16615 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP2A2P16615 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATP2A2P16615 WASH3P-207ENST00000560956 1394 ntBASIC15.96■□□□□ 0.15
ATP2A2P16615 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
ATP2A2P16615 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms