Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.82□□□□□ -0.52
DEFA4P12838 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.82□□□□□ -0.52
DEFA4P12838 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
DEFA4P12838 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
DEFA4P12838 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
DEFA4P12838 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.82□□□□□ -0.52
DEFA4P12838 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.82□□□□□ -0.52
DEFA4P12838 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
DEFA4P12838 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
DEFA4P12838 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 KRT8P24-201ENST00000560290 1559 ntBASIC11.81□□□□□ -0.52
DEFA4P12838 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 TLE1P1-201ENST00000422965 589 ntBASIC11.81□□□□□ -0.52
DEFA4P12838 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.81□□□□□ -0.52
DEFA4P12838 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.81□□□□□ -0.52
DEFA4P12838 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.81□□□□□ -0.52
DEFA4P12838 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.81□□□□□ -0.52
DEFA4P12838 PTP4A1P2-201ENST00000546033 454 ntBASIC11.81□□□□□ -0.52
DEFA4P12838 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
DEFA4P12838 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
DEFA4P12838 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.81□□□□□ -0.52
DEFA4P12838 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 AL355385.1-201ENST00000606123 409 ntBASIC11.81□□□□□ -0.52
DEFA4P12838 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.81□□□□□ -0.52
DEFA4P12838 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 AL445209.1-201ENST00000607269 3491 ntBASIC11.81□□□□□ -0.52
DEFA4P12838 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
DEFA4P12838 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
DEFA4P12838 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
DEFA4P12838 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
DEFA4P12838 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DEFA4P12838 AL118506.1-201ENST00000601296 3082 ntBASIC11.8□□□□□ -0.52
DEFA4P12838 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DEFA4P12838 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
DEFA4P12838 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.8□□□□□ -0.52
DEFA4P12838 AL136172.1-201ENST00000598590 1394 ntBASIC11.8□□□□□ -0.52
DEFA4P12838 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
DEFA4P12838 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DEFA4P12838 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.8□□□□□ -0.52
DEFA4P12838 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.8□□□□□ -0.52
DEFA4P12838 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
DEFA4P12838 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
DEFA4P12838 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.8□□□□□ -0.52
DEFA4P12838 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.8□□□□□ -0.52
DEFA4P12838 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DEFA4P12838 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
DEFA4P12838 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
DEFA4P12838 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
DEFA4P12838 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms