Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.85□□□□□ -0.19
SP9P0CG40 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.85□□□□□ -0.19
SP9P0CG40 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SP9P0CG40 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SP9P0CG40 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SP9P0CG40 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SP9P0CG40 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SP9P0CG40 AC136621.1-201ENST00000624017 2304 ntBASIC13.85□□□□□ -0.19
SP9P0CG40 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.85□□□□□ -0.19
SP9P0CG40 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SP9P0CG40 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
SP9P0CG40 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SP9P0CG40 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
SP9P0CG40 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 AC008620.2-201ENST00000510294 1569 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 OR7E155P-201ENST00000412208 1014 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.84□□□□□ -0.19
SP9P0CG40 HMGA1P2-201ENST00000430198 324 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 EEF1DP2-201ENST00000433698 843 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 OR4C14P-201ENST00000440929 923 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.84□□□□□ -0.19
SP9P0CG40 POLR2LP1-206ENST00000444785 187 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.84□□□□□ -0.19
SP9P0CG40 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.84□□□□□ -0.19
SP9P0CG40 AC104212.2-201ENST00000478813 628 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 AC093700.1-201ENST00000503348 717 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC13.84□□□□□ -0.19
SP9P0CG40 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.84□□□□□ -0.19
SP9P0CG40 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC13.84□□□□□ -0.19
SP9P0CG40 MST1L-204ENST00000545160 559 ntTSL 4 BASIC13.84□□□□□ -0.19
SP9P0CG40 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.84□□□□□ -0.19
SP9P0CG40 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SP9P0CG40 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SP9P0CG40 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 MYADML-201ENST00000474610 2147 ntBASIC13.84□□□□□ -0.19
SP9P0CG40 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.84□□□□□ -0.19
SP9P0CG40 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
SP9P0CG40 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.19
SP9P0CG40 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SP9P0CG40 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
SP9P0CG40 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SP9P0CG40 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SP9P0CG40 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.83□□□□□ -0.19
SP9P0CG40 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SP9P0CG40 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SP9P0CG40 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.83□□□□□ -0.2
SP9P0CG40 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SP9P0CG40 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.83□□□□□ -0.2
SP9P0CG40 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SP9P0CG40 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.83□□□□□ -0.2
SP9P0CG40 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SP9P0CG40 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SP9P0CG40 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SP9P0CG40 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms