Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RB1P06400 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RB1P06400 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.05■□□□□ 0
RB1P06400 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.05■□□□□ 0
RB1P06400 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RB1P06400 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.05■□□□□ 0
RB1P06400 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
RB1P06400 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.05■□□□□ 0
RB1P06400 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RB1P06400 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RB1P06400 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.05■□□□□ 0
RB1P06400 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
RB1P06400 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RB1P06400 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.05■□□□□ -0
RB1P06400 AC073210.1-201ENST00000414799 232 ntBASIC15.05■□□□□ -0
RB1P06400 FAM21EP-201ENST00000417804 985 ntBASIC15.05■□□□□ -0
RB1P06400 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RB1P06400 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.05■□□□□ -0
RB1P06400 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.05■□□□□ -0
RB1P06400 AC093300.1-201ENST00000510368 1201 ntBASIC15.05■□□□□ -0
RB1P06400 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.05■□□□□ -0
RB1P06400 KNOP1P1-201ENST00000542108 989 ntBASIC15.05■□□□□ -0
RB1P06400 AL512310.5-201ENST00000551999 515 ntBASIC15.05■□□□□ -0
RB1P06400 AC132825.4-202ENST00000578792 434 ntBASIC15.05■□□□□ -0
RB1P06400 RN7SL455P-201ENST00000580629 282 ntBASIC15.05■□□□□ -0
RB1P06400 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.05■□□□□ -0
RB1P06400 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.05■□□□□ -0
RB1P06400 AL627230.2-201ENST00000613254 655 ntBASIC15.05■□□□□ -0
RB1P06400 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.05■□□□□ -0
RB1P06400 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.05■□□□□ -0
RB1P06400 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.05■□□□□ -0
RB1P06400 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.05■□□□□ -0
RB1P06400 FKBP4P8-201ENST00000610931 1369 ntBASIC15.05■□□□□ -0
RB1P06400 AC007952.5-201ENST00000572818 1486 ntBASIC15.05■□□□□ -0
RB1P06400 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.05■□□□□ -0
RB1P06400 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.05■□□□□ -0
RB1P06400 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.05■□□□□ -0
RB1P06400 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.05■□□□□ -0
RB1P06400 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RB1P06400 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RB1P06400 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RB1P06400 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.04■□□□□ -0
RB1P06400 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RB1P06400 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RB1P06400 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.04■□□□□ -0
RB1P06400 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.04■□□□□ -0
RB1P06400 AL365181.1-201ENST00000564032 1828 ntBASIC15.04■□□□□ -0
RB1P06400 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 AC138761.6-201ENST00000583997 1423 ntBASIC15.04■□□□□ -0
RB1P06400 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.04■□□□□ -0
RB1P06400 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.04■□□□□ -0
RB1P06400 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.04■□□□□ -0
RB1P06400 AL512599.1-201ENST00000430724 685 ntBASIC15.04■□□□□ -0
RB1P06400 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RB1P06400 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.04■□□□□ -0
RB1P06400 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 STK24P1-201ENST00000455035 1291 ntBASIC15.04■□□□□ -0
RB1P06400 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.04■□□□□ -0
RB1P06400 RN7SL128P-201ENST00000467883 305 ntBASIC15.04■□□□□ -0
RB1P06400 AC023906.1-201ENST00000486386 453 ntBASIC15.04■□□□□ -0
RB1P06400 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 RN7SL288P-201ENST00000490496 291 ntBASIC15.04■□□□□ -0
RB1P06400 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.04■□□□□ -0
RB1P06400 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
RB1P06400 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.04■□□□□ -0
RB1P06400 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.04■□□□□ -0
RB1P06400 MIR5001-201ENST00000580185 100 ntBASIC15.04■□□□□ -0
RB1P06400 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.04■□□□□ -0
RB1P06400 TYMSP2-201ENST00000589501 424 ntBASIC15.04■□□□□ -0
RB1P06400 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.04■□□□□ -0
RB1P06400 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.04■□□□□ -0
RB1P06400 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RB1P06400 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RB1P06400 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RB1P06400 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms