Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.22■□□□□ 0.35
POLR3DP05423 MEG3_2.1-201ENST00000611456 105 ntBASIC17.22■□□□□ 0.35
POLR3DP05423 LINC01783-202ENST00000614408 828 ntBASIC17.22■□□□□ 0.35
POLR3DP05423 BX284668.2-205ENST00000619677 828 ntBASIC17.22■□□□□ 0.35
POLR3DP05423 AL353726.2-201ENST00000623259 884 ntBASIC17.22■□□□□ 0.35
POLR3DP05423 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
POLR3DP05423 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.22■□□□□ 0.35
POLR3DP05423 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.22■□□□□ 0.35
POLR3DP05423 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR3DP05423 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
POLR3DP05423 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
POLR3DP05423 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
POLR3DP05423 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
POLR3DP05423 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.21■□□□□ 0.35
POLR3DP05423 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.21■□□□□ 0.35
POLR3DP05423 AC026320.2-201ENST00000434379 478 ntBASIC17.21■□□□□ 0.35
POLR3DP05423 MAGEA5-201ENST00000446757 942 ntBASIC17.21■□□□□ 0.35
POLR3DP05423 CEP164P1-201ENST00000455142 418 ntBASIC17.21■□□□□ 0.35
POLR3DP05423 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.21■□□□□ 0.35
POLR3DP05423 RN7SL258P-201ENST00000478664 300 ntBASIC17.21■□□□□ 0.35
POLR3DP05423 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.21■□□□□ 0.35
POLR3DP05423 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 AC026803.1-201ENST00000569130 274 ntBASIC17.21■□□□□ 0.35
POLR3DP05423 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
POLR3DP05423 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
POLR3DP05423 AL591471.1-201ENST00000621855 229 ntBASIC17.21■□□□□ 0.35
POLR3DP05423 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR3DP05423 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
POLR3DP05423 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLR3DP05423 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
POLR3DP05423 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 OR2K2-202ENST00000374428 1038 ntBASIC17.2■□□□□ 0.34
POLR3DP05423 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.2■□□□□ 0.34
POLR3DP05423 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.2■□□□□ 0.34
POLR3DP05423 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.2■□□□□ 0.34
POLR3DP05423 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 AC021016.3-201ENST00000608367 477 ntBASIC17.2■□□□□ 0.34
POLR3DP05423 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
POLR3DP05423 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
POLR3DP05423 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
POLR3DP05423 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
POLR3DP05423 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
POLR3DP05423 HSPA7-201ENST00000445535 1927 ntBASIC17.19■□□□□ 0.34
POLR3DP05423 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.19■□□□□ 0.34
POLR3DP05423 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.19■□□□□ 0.34
POLR3DP05423 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
POLR3DP05423 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
POLR3DP05423 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms