Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
APPP05067 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
APPP05067 AL157791.1-201ENST00000553667 1699 ntBASIC17.33■□□□□ 0.37
APPP05067 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
APPP05067 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
APPP05067 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
APPP05067 AC023908.3-201ENST00000564211 3047 ntBASIC17.33■□□□□ 0.37
APPP05067 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.33■□□□□ 0.36
APPP05067 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.33■□□□□ 0.36
APPP05067 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APPP05067 KRT18P36-201ENST00000411618 1276 ntBASIC17.33■□□□□ 0.36
APPP05067 CYP46A4P-201ENST00000414953 267 ntBASIC17.33■□□□□ 0.36
APPP05067 AL161932.2-201ENST00000435436 679 ntBASIC17.33■□□□□ 0.36
APPP05067 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.33■□□□□ 0.36
APPP05067 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.33■□□□□ 0.36
APPP05067 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APPP05067 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.33■□□□□ 0.36
APPP05067 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.33■□□□□ 0.36
APPP05067 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
APPP05067 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APPP05067 NAP1L6-202ENST00000641404 1222 ntBASIC17.33■□□□□ 0.36
APPP05067 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.33■□□□□ 0.36
APPP05067 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APPP05067 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
APPP05067 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
APPP05067 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APPP05067 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
APPP05067 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
APPP05067 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
APPP05067 LINC01230-201ENST00000625222 3017 ntBASIC17.33■□□□□ 0.36
APPP05067 AC090505.1-201ENST00000430515 1834 ntBASIC17.33■□□□□ 0.36
APPP05067 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
APPP05067 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.33■□□□□ 0.36
APPP05067 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.32■□□□□ 0.36
APPP05067 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.32■□□□□ 0.36
APPP05067 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
APPP05067 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 AHCYP4-201ENST00000419201 1315 ntBASIC17.32■□□□□ 0.36
APPP05067 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
APPP05067 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.32■□□□□ 0.36
APPP05067 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
APPP05067 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 MIR769-201ENST00000390225 118 ntBASIC17.32■□□□□ 0.36
APPP05067 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 XBP1P1-201ENST00000436573 652 ntBASIC17.32■□□□□ 0.36
APPP05067 SPTLC1P5-201ENST00000450718 252 ntBASIC17.32■□□□□ 0.36
APPP05067 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.32■□□□□ 0.36
APPP05067 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.32■□□□□ 0.36
APPP05067 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.32■□□□□ 0.36
APPP05067 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.32■□□□□ 0.36
APPP05067 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.32■□□□□ 0.36
APPP05067 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.32■□□□□ 0.36
APPP05067 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.32■□□□□ 0.36
APPP05067 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
APPP05067 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
APPP05067 AC100757.4-201ENST00000626934 759 ntBASIC17.32■□□□□ 0.36
APPP05067 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
APPP05067 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.32■□□□□ 0.36
APPP05067 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
APPP05067 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.32■□□□□ 0.36
APPP05067 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APPP05067 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.31■□□□□ 0.36
APPP05067 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APPP05067 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APPP05067 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
APPP05067 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
APPP05067 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.31■□□□□ 0.36
APPP05067 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
APPP05067 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APPP05067 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.31■□□□□ 0.36
APPP05067 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.31■□□□□ 0.36
APPP05067 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APPP05067 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APPP05067 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
APPP05067 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.31■□□□□ 0.36
APPP05067 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.31■□□□□ 0.36
APPP05067 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
APPP05067 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.31■□□□□ 0.36
APPP05067 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APPP05067 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APPP05067 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
APPP05067 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms