Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 CRCP-204ENST00000398684 492 ntTSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AC016700.1-201ENST00000429424 312 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 XBP1P1-201ENST00000436573 652 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AC091804.1-201ENST00000486888 567 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 MARK2P5-201ENST00000507649 634 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 MIR3615-201ENST00000581999 87 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AL132994.2-201ENST00000603120 687 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 AC026740.1-201ENST00000607068 791 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 AL157813.1-201ENST00000612996 587 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 AC020907.1-201ENST00000616460 1350 ntBASIC11.14□□□□□ -0.63
TRBV12-3P01733 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TRBV12-3P01733 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRBV12-3P01733 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.13□□□□□ -0.63
TRBV12-3P01733 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 FNTAP2-201ENST00000430308 634 ntBASIC11.13□□□□□ -0.63
TRBV12-3P01733 KRT8P13-201ENST00000463294 1010 ntBASIC11.13□□□□□ -0.63
TRBV12-3P01733 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 AC022217.1-201ENST00000521069 738 ntBASIC11.13□□□□□ -0.63
TRBV12-3P01733 SDHD-202ENST00000525291 790 ntTSL 3 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms