Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.23□□□□□ -0.13
PDGFBP01127 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.23□□□□□ -0.13
PDGFBP01127 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFBP01127 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFBP01127 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
PDGFBP01127 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.22□□□□□ -0.13
PDGFBP01127 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 TBC1D27-202ENST00000424239 1573 ntBASIC14.22□□□□□ -0.13
PDGFBP01127 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.22□□□□□ -0.13
PDGFBP01127 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFBP01127 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 AC126365.1-201ENST00000578585 1514 ntBASIC14.22□□□□□ -0.13
PDGFBP01127 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.22□□□□□ -0.13
PDGFBP01127 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFBP01127 AC007679.1-201ENST00000458609 502 ntBASIC14.22□□□□□ -0.13
PDGFBP01127 AC005586.2-201ENST00000563946 837 ntBASIC14.22□□□□□ -0.13
PDGFBP01127 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFBP01127 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC14.22□□□□□ -0.13
PDGFBP01127 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC14.22□□□□□ -0.13
PDGFBP01127 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
PDGFBP01127 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDGFBP01127 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFBP01127 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFBP01127 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFBP01127 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.21□□□□□ -0.13
PDGFBP01127 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PDGFBP01127 SHMT1P1-201ENST00000419974 1312 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PDGFBP01127 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PDGFBP01127 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDGFBP01127 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.21□□□□□ -0.13
PDGFBP01127 HNRNPA1P25-201ENST00000422644 937 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 RPL18AP16-201ENST00000424057 531 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDGFBP01127 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 RNU1-80P-201ENST00000459500 161 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 RN7SL672P-201ENST00000474091 317 ntBASIC14.21□□□□□ -0.13
PDGFBP01127 AC099328.1-201ENST00000498809 1030 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms