Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC14.5□□□□□ -0.09
CFAP99D6REC4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.5□□□□□ -0.09
CFAP99D6REC4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CFAP99D6REC4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CFAP99D6REC4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CFAP99D6REC4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.5□□□□□ -0.09
CFAP99D6REC4 BX640514.1-201ENST00000583223 1918 ntBASIC14.5□□□□□ -0.09
CFAP99D6REC4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.5□□□□□ -0.09
CFAP99D6REC4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CFAP99D6REC4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CFAP99D6REC4 AC215219.1-201ENST00000400706 1817 ntBASIC14.5□□□□□ -0.09
CFAP99D6REC4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.5□□□□□ -0.09
CFAP99D6REC4 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CFAP99D6REC4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CFAP99D6REC4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CFAP99D6REC4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CFAP99D6REC4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.49□□□□□ -0.09
CFAP99D6REC4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 AL023803.2-201ENST00000620080 638 ntBASIC14.49□□□□□ -0.09
CFAP99D6REC4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP99D6REC4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP99D6REC4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 GOLGA2P4-201ENST00000441462 777 ntBASIC14.48□□□□□ -0.09
CFAP99D6REC4 AC244107.1-201ENST00000442033 332 ntBASIC14.48□□□□□ -0.09
CFAP99D6REC4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 RBM8B-201ENST00000555532 525 ntBASIC14.48□□□□□ -0.09
CFAP99D6REC4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP99D6REC4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.48□□□□□ -0.09
CFAP99D6REC4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms