Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RCCD1A6NED2 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCCD1A6NED2 AL031719.1-201ENST00000623365 2587 ntBASIC15.33■□□□□ 0.05
RCCD1A6NED2 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCCD1A6NED2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.05
RCCD1A6NED2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCCD1A6NED2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RCCD1A6NED2 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCCD1A6NED2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
RCCD1A6NED2 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 AL391647.1-201ENST00000395664 511 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 AC136604.1-202ENST00000425471 771 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 PSAT1P2-201ENST00000426107 972 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 FAM207CP-201ENST00000443486 507 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 AC190387.1-201ENST00000551683 408 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 KRT18P8-201ENST00000581937 1246 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 AL365209.1-201ENST00000624418 6473 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
RCCD1A6NED2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 C8orf49-201ENST00000525043 1968 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCCD1A6NED2 REXO1L6P-201ENST00000603433 1515 ntBASIC15.33■□□□□ 0.04
RCCD1A6NED2 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 AL118506.1-201ENST00000601296 3082 ntBASIC15.32■□□□□ 0.04
RCCD1A6NED2 AP000437.1-201ENST00000624057 2085 ntBASIC15.32■□□□□ 0.04
RCCD1A6NED2 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.32■□□□□ 0.04
RCCD1A6NED2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 FAM197Y7-201ENST00000432892 766 ntBASIC15.32■□□□□ 0.04
RCCD1A6NED2 AK2P2-201ENST00000439142 405 ntBASIC15.32■□□□□ 0.04
RCCD1A6NED2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 AL035414.1-201ENST00000451327 857 ntBASIC15.32■□□□□ 0.04
RCCD1A6NED2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 RNA5SP486-201ENST00000515961 83 ntBASIC15.32■□□□□ 0.04
RCCD1A6NED2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 TP53TG3HP-202ENST00000569755 579 ntBASIC15.32■□□□□ 0.04
RCCD1A6NED2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCCD1A6NED2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.32■□□□□ 0.04
RCCD1A6NED2 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms