Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 DFFBP1-201ENST00000433250 979 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 AL161932.2-201ENST00000435436 679 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 AC022137.2-201ENST00000503482 481 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 WASH4P-201ENST00000564273 1246 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 CHCHD2P3-201ENST00000603038 451 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 TMEM261P1-201ENST00000604899 340 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 AC008494.3-201ENST00000606615 944 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 AC104506.1-201ENST00000609247 429 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 BAP1-211ENST00000615113 489 ntBASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.66□□□□□ -0.38
FOXJ3Q9UPW0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 AC020910.5-201ENST00000623668 1865 ntBASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 FKBP4P6-201ENST00000457486 1332 ntBASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 POM121L8P-201ENST00000417732 1281 ntBASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 POM121L9P-203ENST00000441984 1285 ntBASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 FTLP10-202ENST00000505798 471 ntBASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 AC138466.3-201ENST00000619983 221 ntBASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 AL022313.4-201ENST00000562756 2046 ntBASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
FOXJ3Q9UPW0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
FOXJ3Q9UPW0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms