Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 NKILA-202ENST00000614771 2598 ntBASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIMBP3Q9UFD9 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AC012313.1-201ENST00000593393 3059 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AC007322.2-201ENST00000414540 605 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 C2orf27AP2-201ENST00000438438 555 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 RN7SL483P-201ENST00000478417 285 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AL606834.1-201ENST00000553836 1169 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AC011270.2-201ENST00000624293 2550 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AC008038.1-201ENST00000634247 1314 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 NBEAP3-201ENST00000420638 1493 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AL513477.1-201ENST00000602865 2407 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 Z97653.2-201ENST00000623057 1418 ntBASIC21.62■■□□□ 1.05
RIMBP3Q9UFD9 POM121L14P-201ENST00000406100 1558 ntBASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 RN7SL16P-201ENST00000476316 269 ntBASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 ASS1P9-201ENST00000513426 1236 ntBASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 AC063924.1-201ENST00000546680 673 ntBASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.61■■□□□ 1.05
RIMBP3Q9UFD9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC024075.2-201ENST00000598112 1473 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC099689.1-201ENST00000624383 1302 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 U3.49-201ENST00000391065 214 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms