Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 USP17L6P-201ENST00000382470 1197 ntBASIC16.1■□□□□ 0.17
COL20A1Q9P218 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 LYPLA2P1-203ENST00000447689 696 ntBASIC16.1■□□□□ 0.17
COL20A1Q9P218 AC018463.1-201ENST00000456674 917 ntBASIC16.1■□□□□ 0.17
COL20A1Q9P218 RN7SL564P-201ENST00000496309 250 ntBASIC16.1■□□□□ 0.17
COL20A1Q9P218 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 NUDT4P2-201ENST00000578341 546 ntBASIC16.1■□□□□ 0.17
COL20A1Q9P218 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 RN7SL470P-201ENST00000583069 259 ntBASIC16.1■□□□□ 0.17
COL20A1Q9P218 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 DPY19L2P5-201ENST00000456300 331 ntBASIC16.09■□□□□ 0.17
COL20A1Q9P218 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 SLC25A15P3-201ENST00000505530 290 ntBASIC16.09■□□□□ 0.17
COL20A1Q9P218 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 IGHV3-37-201ENST00000518544 340 ntBASIC16.09■□□□□ 0.17
COL20A1Q9P218 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 AC105137.3-201ENST00000617588 984 ntBASIC16.09■□□□□ 0.17
COL20A1Q9P218 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 AC090502.4-201ENST00000551714 1386 ntBASIC16.09■□□□□ 0.17
COL20A1Q9P218 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
COL20A1Q9P218 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL20A1Q9P218 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL20A1Q9P218 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.08■□□□□ 0.17
COL20A1Q9P218 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL20A1Q9P218 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.08■□□□□ 0.17
COL20A1Q9P218 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
COL20A1Q9P218 LINC02486-201ENST00000604157 3000 ntBASIC16.08■□□□□ 0.17
COL20A1Q9P218 AC068760.1-201ENST00000493579 1953 ntBASIC16.08■□□□□ 0.16
COL20A1Q9P218 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL20A1Q9P218 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms