Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 AHCYP4-201ENST00000419201 1315 ntBASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 NORAD-201ENST00000565493 5339 ntBASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RPAP1Q9BWH6 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 TSPY25P-201ENST00000429463 745 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 OR2R1P-201ENST00000441404 914 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC130709.1-201ENST00000484779 1212 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC008723.1-201ENST00000506922 207 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC003686.1-201ENST00000550956 1034 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC005586.2-201ENST00000563946 837 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 MIR4750-201ENST00000584564 56 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC007718.1-201ENST00000621078 280 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC026320.2-201ENST00000434379 478 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 RN7SL8P-201ENST00000461771 266 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 DNM1P30-201ENST00000563586 452 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 AC087045.2-201ENST00000606279 1003 ntBASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPAP1Q9BWH6 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RPAP1Q9BWH6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
RPAP1Q9BWH6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.39■□□□□ 0.38
RPAP1Q9BWH6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 KRT8P31-201ENST00000504812 1408 ntBASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 RNA5SP359-201ENST00000364838 113 ntBASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 AL161932.2-201ENST00000435436 679 ntBASIC17.39■□□□□ 0.37
RPAP1Q9BWH6 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms