Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13□□□□□ -0.33
TRAF4Q9BUZ4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 AC090505.1-201ENST00000430515 1834 ntBASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 AC245100.3-201ENST00000441281 285 ntBASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 AP006547.1-201ENST00000563435 692 ntBASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 AC104982.3-201ENST00000581995 514 ntBASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAF4Q9BUZ4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 TRIM80P-201ENST00000455685 2848 ntBASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 GHSR-202ENST00000427970 912 ntBASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 EIF3FP3-201ENST00000434851 1086 ntBASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 FAM8A4P-201ENST00000435433 1213 ntBASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 AC022616.1-201ENST00000518688 554 ntBASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 AL603764.1-201ENST00000636452 321 ntBASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF4Q9BUZ4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms