Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AC098614.1-201ENST00000368528 745 ntBASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AL136309.1-201ENST00000403917 691 ntBASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AL035414.1-201ENST00000451327 857 ntBASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AC132938.2-201ENST00000579188 680 ntBASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AC015936.2-201ENST00000593177 259 ntBASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AL136301.1-201ENST00000615830 422 ntBASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AC025048.6-201ENST00000634326 1161 ntBASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AL591163.1-201ENST00000641757 987 ntBASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATG4AQ8WYN0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AC004241.5-201ENST00000623870 2448 ntBASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AL445209.1-201ENST00000607269 3491 ntBASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AC087386.2-201ENST00000623212 4637 ntBASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 MIR1202-201ENST00000408529 83 ntBASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 CNN2P8-201ENST00000421872 913 ntBASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AC016694.1-201ENST00000434179 700 ntBASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 TTTY23B-201ENST00000442790 549 ntBASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 AL022328.1-201ENST00000610050 478 ntBASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.96□□□□□ -0.01
ATG4AQ8WYN0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.96□□□□□ -0.02
ATG4AQ8WYN0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ATG4AQ8WYN0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ATG4AQ8WYN0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms