Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 AC007389.4-201ENST00000454674 793 ntBASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 RN7SL837P-201ENST00000463010 287 ntBASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 RPSAP52-203ENST00000622976 1023 ntBASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 AL365181.3-201ENST00000605886 3222 ntBASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTN4IP1Q8WWV3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 AC068760.1-201ENST00000493579 1953 ntBASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 AC114271.1-201ENST00000612689 2813 ntBASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 AP005018.1-201ENST00000525475 301 ntBASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 AL596325.1-201ENST00000563991 1082 ntBASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTN4IP1Q8WWV3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms