Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AC104506.1-201ENST00000609247 429 ntBASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSMD3Q7Z3D4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 CICP16-201ENST00000502609 2813 ntBASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSMD3Q7Z3D4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AC003686.1-201ENST00000550956 1034 ntBASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AC124068.2-201ENST00000569473 1109 ntBASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AP003400.6-201ENST00000624698 740 ntBASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AC244452.3-201ENST00000636814 210 ntBASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 AC018629.1-201ENST00000623381 1736 ntBASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSMD3Q7Z3D4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 BCYRN1-201ENST00000418539 200 ntBASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 OR2R1P-201ENST00000441404 914 ntBASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms