Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 AL365181.3-201ENST00000605886 3222 ntBASIC13.9□□□□□ -0.18
RFTN2Q52LD8 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RFTN2Q52LD8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 AC006001.1-201ENST00000325130 474 ntBASIC13.89□□□□□ -0.19
RFTN2Q52LD8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CHMP1AP1-201ENST00000445563 662 ntBASIC13.89□□□□□ -0.19
RFTN2Q52LD8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 AC007551.1-201ENST00000457394 519 ntBASIC13.89□□□□□ -0.19
RFTN2Q52LD8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 SHC1P1-201ENST00000425230 1745 ntBASIC13.89□□□□□ -0.19
RFTN2Q52LD8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 TMBIM7P-202ENST00000641474 1516 ntBASIC13.89□□□□□ -0.19
RFTN2Q52LD8 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFTN2Q52LD8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 TTTY23B-201ENST00000442790 549 ntBASIC13.88□□□□□ -0.19
RFTN2Q52LD8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 KRT90P-201ENST00000549264 1064 ntBASIC13.88□□□□□ -0.19
RFTN2Q52LD8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 AC027307.3-201ENST00000594262 1100 ntBASIC13.88□□□□□ -0.19
RFTN2Q52LD8 ZACNP1-201ENST00000612259 710 ntBASIC13.88□□□□□ -0.19
RFTN2Q52LD8 AL136301.1-201ENST00000615830 422 ntBASIC13.88□□□□□ -0.19
RFTN2Q52LD8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.88□□□□□ -0.19
RFTN2Q52LD8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms