Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 KRT8P42-201ENST00000405771 1399 ntBASIC20.61■□□□□ 0.89
ATP7AQ04656 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP7AQ04656 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP7AQ04656 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP7AQ04656 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP7AQ04656 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ATP7AQ04656 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP7AQ04656 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP7AQ04656 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP7AQ04656 HNRNPA3P12-201ENST00000437410 1063 ntBASIC20.61■□□□□ 0.89
ATP7AQ04656 AC007279.1-201ENST00000448547 837 ntBASIC20.61■□□□□ 0.89
ATP7AQ04656 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC20.61■□□□□ 0.89
ATP7AQ04656 URB1-AS1-201ENST00000534991 831 ntBASIC20.61■□□□□ 0.89
ATP7AQ04656 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP7AQ04656 AC010202.1-201ENST00000551181 405 ntBASIC20.61■□□□□ 0.89
ATP7AQ04656 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP7AQ04656 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 AP001267.2-201ENST00000532619 2086 ntBASIC20.61■□□□□ 0.89
ATP7AQ04656 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP7AQ04656 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP7AQ04656 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ATP7AQ04656 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP7AQ04656 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP7AQ04656 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP7AQ04656 KRT18P44-201ENST00000416086 1285 ntBASIC20.6■□□□□ 0.89
ATP7AQ04656 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP7AQ04656 RHOQP2-201ENST00000449922 579 ntBASIC20.6■□□□□ 0.89
ATP7AQ04656 SNRPD2P2-201ENST00000473818 333 ntBASIC20.6■□□□□ 0.89
ATP7AQ04656 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP7AQ04656 METTL7AP1-201ENST00000547343 496 ntBASIC20.6■□□□□ 0.89
ATP7AQ04656 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP7AQ04656 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP7AQ04656 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC20.6■□□□□ 0.89
ATP7AQ04656 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP7AQ04656 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 AC092384.3-202ENST00000564646 2873 ntBASIC20.6■□□□□ 0.89
ATP7AQ04656 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP7AQ04656 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP7AQ04656 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP7AQ04656 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
ATP7AQ04656 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
ATP7AQ04656 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP7AQ04656 AL513477.1-201ENST00000602865 2407 ntBASIC20.59■□□□□ 0.89
ATP7AQ04656 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
ATP7AQ04656 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC20.59■□□□□ 0.89
ATP7AQ04656 AC015818.1-201ENST00000451011 244 ntBASIC20.59■□□□□ 0.89
ATP7AQ04656 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP7AQ04656 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 AC233724.9-201ENST00000511694 407 ntBASIC20.59■□□□□ 0.89
ATP7AQ04656 LY6E-215ENST00000523847 427 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP7AQ04656 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP7AQ04656 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC20.59■□□□□ 0.89
ATP7AQ04656 BAP1-211ENST00000615113 489 ntBASIC20.59■□□□□ 0.89
ATP7AQ04656 AC009041.4-201ENST00000620075 638 ntBASIC20.59■□□□□ 0.89
ATP7AQ04656 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ATP7AQ04656 AC126177.1-201ENST00000547829 2218 ntBASIC20.59■□□□□ 0.89
ATP7AQ04656 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ATP7AQ04656 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP7AQ04656 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP7AQ04656 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP7AQ04656 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP7AQ04656 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms