Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDKL1Q00532 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDKL1Q00532 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CDKL1Q00532 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKL1Q00532 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 HSPA8P5-201ENST00000456928 2069 ntBASIC14.24□□□□□ -0.13
CDKL1Q00532 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.24□□□□□ -0.13
CDKL1Q00532 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.24□□□□□ -0.13
CDKL1Q00532 AC026954.1-201ENST00000429771 1293 ntBASIC14.24□□□□□ -0.13
CDKL1Q00532 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.24□□□□□ -0.13
CDKL1Q00532 HIST2H2BB-201ENST00000449108 381 ntBASIC14.24□□□□□ -0.13
CDKL1Q00532 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.24□□□□□ -0.13
CDKL1Q00532 DUX4L46-201ENST00000566845 751 ntBASIC14.24□□□□□ -0.13
CDKL1Q00532 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.24□□□□□ -0.13
CDKL1Q00532 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.24□□□□□ -0.13
CDKL1Q00532 AL512343.1-201ENST00000605837 169 ntBASIC14.24□□□□□ -0.13
CDKL1Q00532 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDKL1Q00532 AC114271.1-201ENST00000612689 2813 ntBASIC14.24□□□□□ -0.13
CDKL1Q00532 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKL1Q00532 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDKL1Q00532 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CDKL1Q00532 AC068760.1-201ENST00000493579 1953 ntBASIC14.23□□□□□ -0.13
CDKL1Q00532 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKL1Q00532 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKL1Q00532 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.23□□□□□ -0.13
CDKL1Q00532 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDKL1Q00532 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CDKL1Q00532 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDKL1Q00532 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.23□□□□□ -0.13
CDKL1Q00532 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.23□□□□□ -0.13
CDKL1Q00532 AC079776.1-201ENST00000401540 1152 ntBASIC14.23□□□□□ -0.13
CDKL1Q00532 CTBP2P5-201ENST00000454986 1264 ntBASIC14.23□□□□□ -0.13
CDKL1Q00532 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.23□□□□□ -0.13
CDKL1Q00532 RAB43P1-201ENST00000561790 589 ntBASIC14.23□□□□□ -0.13
CDKL1Q00532 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.23□□□□□ -0.13
CDKL1Q00532 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKL1Q00532 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKL1Q00532 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKL1Q00532 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKL1Q00532 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDKL1Q00532 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKL1Q00532 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKL1Q00532 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms