Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC9.9□□□□□ -0.82
PRKDCP78527 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
PRKDCP78527 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC9.9□□□□□ -0.82
PRKDCP78527 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
PRKDCP78527 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC9.9□□□□□ -0.82
PRKDCP78527 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 AL365203.3-201ENST00000609742 2057 ntBASIC9.9□□□□□ -0.82
PRKDCP78527 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC9.9□□□□□ -0.82
PRKDCP78527 AQP7-207ENST00000447660 998 ntTSL 2 BASIC9.9□□□□□ -0.82
PRKDCP78527 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC9.9□□□□□ -0.82
PRKDCP78527 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC9.9□□□□□ -0.82
PRKDCP78527 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
PRKDCP78527 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC9.9□□□□□ -0.82
PRKDCP78527 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
PRKDCP78527 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC9.9□□□□□ -0.82
PRKDCP78527 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
PRKDCP78527 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC9.9□□□□□ -0.82
PRKDCP78527 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
PRKDCP78527 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC9.9□□□□□ -0.83
PRKDCP78527 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
PRKDCP78527 Z69706.1-201ENST00000595428 547 ntBASIC9.9□□□□□ -0.83
PRKDCP78527 AL357137.1-201ENST00000604645 203 ntBASIC9.9□□□□□ -0.83
PRKDCP78527 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
PRKDCP78527 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
PRKDCP78527 MIR941-1-201ENST00000636396 72 ntBASIC9.9□□□□□ -0.83
PRKDCP78527 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
PRKDCP78527 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC9.9□□□□□ -0.83
PRKDCP78527 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC9.9□□□□□ -0.83
PRKDCP78527 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
PRKDCP78527 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
PRKDCP78527 AC126365.1-201ENST00000578585 1514 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
PRKDCP78527 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC9.89□□□□□ -0.83
PRKDCP78527 AC011773.4-202ENST00000566000 1264 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 AC138907.9-201ENST00000623747 986 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC9.89□□□□□ -0.83
PRKDCP78527 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC9.89□□□□□ -0.83
PRKDCP78527 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC9.89□□□□□ -0.83
PRKDCP78527 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 MTND6P4-201ENST00000506002 522 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC9.89□□□□□ -0.83
PRKDCP78527 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC9.89□□□□□ -0.83
PRKDCP78527 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 AC005586.2-201ENST00000563946 837 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC9.89□□□□□ -0.83
PRKDCP78527 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC9.89□□□□□ -0.83
PRKDCP78527 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
PRKDCP78527 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 CDC20P1-201ENST00000488829 1500 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 Z97653.2-201ENST00000623057 1418 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC9.89□□□□□ -0.83
PRKDCP78527 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
PRKDCP78527 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 HLA-DRB9-201ENST00000449413 343 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 AC067942.1-202ENST00000471756 1057 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 RPL18P1-201ENST00000497218 552 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 AC022296.3-201ENST00000608823 403 ntBASIC9.89□□□□□ -0.83
PRKDCP78527 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
PRKDCP78527 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PRKDCP78527 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
PRKDCP78527 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms