Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.5□□□□□ -0.25
CDH12P55289 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CDH12P55289 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.5□□□□□ -0.25
CDH12P55289 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.5□□□□□ -0.25
CDH12P55289 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 AL391280.1-201ENST00000506969 1062 ntBASIC13.5□□□□□ -0.25
CDH12P55289 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.5□□□□□ -0.25
CDH12P55289 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 AC068760.1-201ENST00000493579 1953 ntBASIC13.5□□□□□ -0.25
CDH12P55289 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CDH12P55289 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CDH12P55289 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
CDH12P55289 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.5□□□□□ -0.25
CDH12P55289 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CDH12P55289 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.5□□□□□ -0.25
CDH12P55289 AC019294.4-201ENST00000561777 2905 ntBASIC13.5□□□□□ -0.25
CDH12P55289 AL590440.2-201ENST00000641973 1595 ntBASIC13.49□□□□□ -0.25
CDH12P55289 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH12P55289 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CDH12P55289 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH12P55289 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CDH12P55289 NUTM2HP-201ENST00000442076 2498 ntBASIC13.49□□□□□ -0.25
CDH12P55289 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CDH12P55289 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CDH12P55289 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH12P55289 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.49□□□□□ -0.25
CDH12P55289 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 AP006294.1-201ENST00000415407 339 ntBASIC13.49□□□□□ -0.25
CDH12P55289 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 AC106760.1-201ENST00000508690 800 ntBASIC13.49□□□□□ -0.25
CDH12P55289 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.49□□□□□ -0.25
CDH12P55289 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.49□□□□□ -0.25
CDH12P55289 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDH12P55289 BX088702.1-201ENST00000610784 235 ntBASIC13.49□□□□□ -0.25
CDH12P55289 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH12P55289 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.49□□□□□ -0.25
CDH12P55289 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH12P55289 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDH12P55289 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH12P55289 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.49□□□□□ -0.25
CDH12P55289 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms