Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA3P52797 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNA3P52797 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA3P52797 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNA3P52797 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.47□□□□□ -0.25
EFNA3P52797 MIR6769A-201ENST00000617340 73 ntBASIC13.47□□□□□ -0.25
EFNA3P52797 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 BRD7P5-201ENST00000299197 1822 ntBASIC13.47□□□□□ -0.25
EFNA3P52797 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA3P52797 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNA3P52797 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
EFNA3P52797 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
EFNA3P52797 AL022313.4-201ENST00000562756 2046 ntBASIC13.47□□□□□ -0.25
EFNA3P52797 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 TBC1D3J-201ENST00000620719 1426 ntBASIC13.47□□□□□ -0.25
EFNA3P52797 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
EFNA3P52797 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
EFNA3P52797 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
EFNA3P52797 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNA3P52797 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNA3P52797 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 OR8T1P-201ENST00000421347 918 ntBASIC13.46□□□□□ -0.25
EFNA3P52797 AL353637.1-201ENST00000451571 732 ntBASIC13.46□□□□□ -0.25
EFNA3P52797 AC234782.1-201ENST00000451950 919 ntBASIC13.46□□□□□ -0.25
EFNA3P52797 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.46□□□□□ -0.25
EFNA3P52797 RN7SL67P-201ENST00000492147 296 ntBASIC13.46□□□□□ -0.25
EFNA3P52797 POU5F1P2-201ENST00000521750 823 ntBASIC13.46□□□□□ -0.25
EFNA3P52797 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.46□□□□□ -0.25
EFNA3P52797 PRKXP1-201ENST00000561423 1122 ntBASIC13.46□□□□□ -0.25
EFNA3P52797 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
EFNA3P52797 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.46□□□□□ -0.25
EFNA3P52797 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 AC021016.3-201ENST00000608367 477 ntBASIC13.46□□□□□ -0.25
EFNA3P52797 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA3P52797 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
EFNA3P52797 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.46□□□□□ -0.26
EFNA3P52797 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.46□□□□□ -0.26
EFNA3P52797 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
EFNA3P52797 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNA3P52797 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNA3P52797 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNA3P52797 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.46□□□□□ -0.26
EFNA3P52797 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
EFNA3P52797 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
EFNA3P52797 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
EFNA3P52797 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.45□□□□□ -0.26
EFNA3P52797 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.45□□□□□ -0.26
EFNA3P52797 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
EFNA3P52797 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
EFNA3P52797 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
EFNA3P52797 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
EFNA3P52797 CCT8L1P-201ENST00000465400 1674 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms