Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.87□□□□□ -0.35
CSNK1A1P48729 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 TUBB8P8-201ENST00000458717 1058 ntBASIC12.87□□□□□ -0.35
CSNK1A1P48729 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 FAM86HP-204ENST00000513466 959 ntBASIC12.87□□□□□ -0.35
CSNK1A1P48729 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AC021016.3-201ENST00000608367 477 ntBASIC12.87□□□□□ -0.35
CSNK1A1P48729 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.87□□□□□ -0.35
CSNK1A1P48729 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AL928921.2-201ENST00000641325 2442 ntBASIC12.87□□□□□ -0.35
CSNK1A1P48729 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 KRT8P29-201ENST00000420409 1371 ntBASIC12.86□□□□□ -0.35
CSNK1A1P48729 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 AC133540.1-201ENST00000620845 1019 ntBASIC12.86□□□□□ -0.35
CSNK1A1P48729 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1A1P48729 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1A1P48729 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1A1P48729 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1A1P48729 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms