Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.47■□□□□ 0.07
SSR1P43307 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SSR1P43307 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.47■□□□□ 0.07
SSR1P43307 TTTY23B-201ENST00000442790 549 ntBASIC15.47■□□□□ 0.07
SSR1P43307 INE1-201ENST00000456273 945 ntBASIC15.47■□□□□ 0.07
SSR1P43307 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SSR1P43307 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.47■□□□□ 0.07
SSR1P43307 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.47■□□□□ 0.07
SSR1P43307 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.47■□□□□ 0.07
SSR1P43307 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.47■□□□□ 0.07
SSR1P43307 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.47■□□□□ 0.07
SSR1P43307 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.47■□□□□ 0.07
SSR1P43307 OR10B1P-201ENST00000601666 907 ntBASIC15.47■□□□□ 0.07
SSR1P43307 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.47■□□□□ 0.07
SSR1P43307 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
SSR1P43307 OR2I1P-208ENST00000641137 4948 ntBASIC15.47■□□□□ 0.07
SSR1P43307 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.47■□□□□ 0.07
SSR1P43307 AC007614.4-201ENST00000564048 1827 ntBASIC15.47■□□□□ 0.07
SSR1P43307 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SSR1P43307 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SSR1P43307 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SSR1P43307 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.47■□□□□ 0.07
SSR1P43307 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.47■□□□□ 0.07
SSR1P43307 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SSR1P43307 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.47■□□□□ 0.07
SSR1P43307 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SSR1P43307 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SSR1P43307 AC004899.2-201ENST00000622993 3860 ntBASIC15.46■□□□□ 0.07
SSR1P43307 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 AC016397.2-201ENST00000624848 1985 ntBASIC15.46■□□□□ 0.07
SSR1P43307 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
SSR1P43307 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.46■□□□□ 0.07
SSR1P43307 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.46■□□□□ 0.07
SSR1P43307 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.46■□□□□ 0.07
SSR1P43307 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.46■□□□□ 0.07
SSR1P43307 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.46■□□□□ 0.07
SSR1P43307 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 AC025279.2-201ENST00000569730 653 ntBASIC15.46■□□□□ 0.07
SSR1P43307 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.46■□□□□ 0.07
SSR1P43307 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.46■□□□□ 0.07
SSR1P43307 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SSR1P43307 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.46■□□□□ 0.07
SSR1P43307 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.46■□□□□ 0.07
SSR1P43307 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
SSR1P43307 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.46■□□□□ 0.07
SSR1P43307 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SSR1P43307 CICP16-201ENST00000502609 2813 ntBASIC15.46■□□□□ 0.07
SSR1P43307 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SSR1P43307 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SSR1P43307 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SSR1P43307 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SSR1P43307 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SSR1P43307 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SSR1P43307 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SSR1P43307 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SSR1P43307 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SSR1P43307 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSR1P43307 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSR1P43307 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.45■□□□□ 0.06
SSR1P43307 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SSR1P43307 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.45■□□□□ 0.06
SSR1P43307 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SSR1P43307 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSR1P43307 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.45■□□□□ 0.06
SSR1P43307 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSR1P43307 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms