Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC148477.9-201ENST00000623974 539 ntBASIC18.98■□□□□ 0.63
USP6P35125 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC18.98■□□□□ 0.63
USP6P35125 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
USP6P35125 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
USP6P35125 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6P35125 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 AC097359.2-201ENST00000604992 2389 ntBASIC18.97■□□□□ 0.63
USP6P35125 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6P35125 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6P35125 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.97■□□□□ 0.63
USP6P35125 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6P35125 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC18.97■□□□□ 0.63
USP6P35125 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC18.97■□□□□ 0.63
USP6P35125 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC18.97■□□□□ 0.63
USP6P35125 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC18.97■□□□□ 0.63
USP6P35125 RN7SL351P-201ENST00000469306 248 ntBASIC18.97■□□□□ 0.63
USP6P35125 SEPHS2P1-201ENST00000511618 1162 ntBASIC18.97■□□□□ 0.63
USP6P35125 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
USP6P35125 AC027139.1-201ENST00000565286 951 ntBASIC18.97■□□□□ 0.63
USP6P35125 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
USP6P35125 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6P35125 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 SALL4P6-201ENST00000429385 1691 ntBASIC18.97■□□□□ 0.63
USP6P35125 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USP6P35125 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
USP6P35125 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC18.97■□□□□ 0.63
USP6P35125 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP6P35125 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6P35125 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6P35125 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6P35125 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6P35125 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6P35125 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6P35125 AL390755.1-201ENST00000623716 2027 ntBASIC18.96■□□□□ 0.63
USP6P35125 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.96■□□□□ 0.63
USP6P35125 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6P35125 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USP6P35125 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
USP6P35125 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
USP6P35125 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
USP6P35125 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 U3.5-201ENST00000363448 216 ntBASIC18.96■□□□□ 0.63
USP6P35125 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 MIR1307-201ENST00000408840 149 ntBASIC18.96■□□□□ 0.63
USP6P35125 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.96■□□□□ 0.63
USP6P35125 BAK1P2-201ENST00000532665 631 ntBASIC18.96■□□□□ 0.63
USP6P35125 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
USP6P35125 KNOP1P1-201ENST00000542108 989 ntBASIC18.96■□□□□ 0.63
USP6P35125 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6P35125 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC18.96■□□□□ 0.63
USP6P35125 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC18.96■□□□□ 0.63
USP6P35125 BAP1-211ENST00000615113 489 ntBASIC18.96■□□□□ 0.63
USP6P35125 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.96■□□□□ 0.63
USP6P35125 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
USP6P35125 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP6P35125 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
USP6P35125 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
USP6P35125 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.96■□□□□ 0.62
USP6P35125 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP6P35125 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms