Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
EPHA3P29320 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.08□□□□□ -0.16
EPHA3P29320 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.08□□□□□ -0.16
EPHA3P29320 ENPP7P14-201ENST00000621765 1040 ntBASIC14.08□□□□□ -0.16
EPHA3P29320 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.08□□□□□ -0.16
EPHA3P29320 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.08□□□□□ -0.16
EPHA3P29320 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
EPHA3P29320 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
EPHA3P29320 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.08□□□□□ -0.16
EPHA3P29320 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPHA3P29320 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EPHA3P29320 AP000593.2-201ENST00000542775 1433 ntBASIC14.07□□□□□ -0.16
EPHA3P29320 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.07□□□□□ -0.16
EPHA3P29320 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
EPHA3P29320 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 RN7SKP175-201ENST00000408472 289 ntBASIC14.07□□□□□ -0.16
EPHA3P29320 DFFBP1-201ENST00000433250 979 ntBASIC14.07□□□□□ -0.16
EPHA3P29320 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.07□□□□□ -0.16
EPHA3P29320 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.07□□□□□ -0.16
EPHA3P29320 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.07□□□□□ -0.16
EPHA3P29320 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.07□□□□□ -0.16
EPHA3P29320 AC145423.3-201ENST00000615987 467 ntBASIC14.07□□□□□ -0.16
EPHA3P29320 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
EPHA3P29320 CU634019.7-201ENST00000624153 1185 ntBASIC14.07□□□□□ -0.16
EPHA3P29320 FP236241.2-201ENST00000624906 1185 ntBASIC14.07□□□□□ -0.16
EPHA3P29320 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.07□□□□□ -0.16
EPHA3P29320 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.07□□□□□ -0.16
EPHA3P29320 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.07□□□□□ -0.16
EPHA3P29320 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 MARK2P9-201ENST00000430958 1727 ntBASIC14.07□□□□□ -0.16
EPHA3P29320 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EPHA3P29320 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.07□□□□□ -0.16
EPHA3P29320 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.06□□□□□ -0.16
EPHA3P29320 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms