Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 PFN1P12-201ENST00000455938 534 ntBASIC13.56□□□□□ -0.24
CHMP24386 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.56□□□□□ -0.24
CHMP24386 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.56□□□□□ -0.24
CHMP24386 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.56□□□□□ -0.24
CHMP24386 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.56□□□□□ -0.24
CHMP24386 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 AC004466.1-201ENST00000599515 1080 ntBASIC13.56□□□□□ -0.24
CHMP24386 OR10B1P-201ENST00000601666 907 ntBASIC13.56□□□□□ -0.24
CHMP24386 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 MIR6074-201ENST00000612054 107 ntBASIC13.56□□□□□ -0.24
CHMP24386 ZACNP1-201ENST00000612259 710 ntBASIC13.56□□□□□ -0.24
CHMP24386 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 AC111170.3-201ENST00000624282 2464 ntBASIC13.56□□□□□ -0.24
CHMP24386 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CHMP24386 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 AP000593.2-201ENST00000542775 1433 ntBASIC13.56□□□□□ -0.24
CHMP24386 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 HSPA8P5-201ENST00000456928 2069 ntBASIC13.55□□□□□ -0.24
CHMP24386 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.55□□□□□ -0.24
CHMP24386 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 ACTBP11-201ENST00000436287 1126 ntBASIC13.55□□□□□ -0.24
CHMP24386 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.55□□□□□ -0.24
CHMP24386 AL391280.1-201ENST00000506969 1062 ntBASIC13.55□□□□□ -0.24
CHMP24386 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.55□□□□□ -0.24
CHMP24386 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.55□□□□□ -0.24
CHMP24386 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CHMP24386 AC090643.2-201ENST00000623442 2029 ntBASIC13.55□□□□□ -0.24
CHMP24386 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 FKBP4P6-201ENST00000457486 1332 ntBASIC13.55□□□□□ -0.24
CHMP24386 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CHMP24386 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHMP24386 SALL4P5-201ENST00000419001 1760 ntBASIC13.55□□□□□ -0.24
CHMP24386 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms