Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CCL1P22362 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CCL1P22362 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CCL1P22362 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CCL1P22362 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.38□□□□□ -0.43
CCL1P22362 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 KRT18P36-201ENST00000411618 1276 ntBASIC12.38□□□□□ -0.43
CCL1P22362 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.38□□□□□ -0.43
CCL1P22362 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCL1P22362 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL1P22362 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CCL1P22362 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL1P22362 PGAM1P5-201ENST00000548011 764 ntBASIC12.38□□□□□ -0.43
CCL1P22362 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL1P22362 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 AC244157.2-201ENST00000616239 1006 ntBASIC12.38□□□□□ -0.43
CCL1P22362 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL1P22362 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CCL1P22362 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CCL1P22362 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 CYP4F23P-201ENST00000593402 1579 ntBASIC12.38□□□□□ -0.43
CCL1P22362 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL1P22362 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL1P22362 AL590824.1-201ENST00000403828 1349 ntBASIC12.37□□□□□ -0.43
CCL1P22362 AHCYP4-201ENST00000419201 1315 ntBASIC12.37□□□□□ -0.43
CCL1P22362 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CCL1P22362 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CCL1P22362 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CCL1P22362 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCL1P22362 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL1P22362 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL1P22362 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL1P22362 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL1P22362 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CCL1P22362 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.37□□□□□ -0.43
CCL1P22362 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL1P22362 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.37□□□□□ -0.43
CCL1P22362 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL1P22362 AL354877.1-201ENST00000424412 413 ntBASIC12.37□□□□□ -0.43
CCL1P22362 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CCL1P22362 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL1P22362 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.37□□□□□ -0.43
CCL1P22362 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.37□□□□□ -0.43
CCL1P22362 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL1P22362 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.37□□□□□ -0.43
CCL1P22362 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.37□□□□□ -0.43
CCL1P22362 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.37□□□□□ -0.43
CCL1P22362 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL1P22362 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CCL1P22362 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.37□□□□□ -0.43
CCL1P22362 AL160314.3-201ENST00000556041 767 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms