Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ATF1P18846 LINC02486-201ENST00000604157 3000 ntBASIC12.71□□□□□ -0.37
ATF1P18846 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ATF1P18846 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
ATF1P18846 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.71□□□□□ -0.37
ATF1P18846 MIR770-201ENST00000390219 98 ntBASIC12.71□□□□□ -0.37
ATF1P18846 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 FAM207CP-201ENST00000443486 507 ntBASIC12.71□□□□□ -0.37
ATF1P18846 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.71□□□□□ -0.37
ATF1P18846 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.71□□□□□ -0.37
ATF1P18846 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.71□□□□□ -0.37
ATF1P18846 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.71□□□□□ -0.37
ATF1P18846 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.71□□□□□ -0.37
ATF1P18846 AP001002.3-201ENST00000623482 206 ntBASIC12.71□□□□□ -0.37
ATF1P18846 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATF1P18846 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATF1P18846 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ATF1P18846 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ATF1P18846 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATF1P18846 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.71□□□□□ -0.38
ATF1P18846 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.71□□□□□ -0.38
ATF1P18846 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ATF1P18846 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
ATF1P18846 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ATF1P18846 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATF1P18846 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.71□□□□□ -0.38
ATF1P18846 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.7□□□□□ -0.38
ATF1P18846 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
ATF1P18846 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ATF1P18846 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
ATF1P18846 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ATF1P18846 FKBP4P6-201ENST00000457486 1332 ntBASIC12.7□□□□□ -0.38
ATF1P18846 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.7□□□□□ -0.38
ATF1P18846 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
ATF1P18846 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.7□□□□□ -0.38
ATF1P18846 POM121L8P-201ENST00000417732 1281 ntBASIC12.7□□□□□ -0.38
ATF1P18846 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.7□□□□□ -0.38
ATF1P18846 POM121L9P-203ENST00000441984 1285 ntBASIC12.7□□□□□ -0.38
ATF1P18846 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.7□□□□□ -0.38
ATF1P18846 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.7□□□□□ -0.38
ATF1P18846 LINC02560-201ENST00000596379 459 ntBASIC12.7□□□□□ -0.38
ATF1P18846 AC138466.3-201ENST00000619983 221 ntBASIC12.7□□□□□ -0.38
ATF1P18846 ENPP7P14-201ENST00000621765 1040 ntBASIC12.7□□□□□ -0.38
ATF1P18846 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.7□□□□□ -0.38
ATF1P18846 AL928654.5-201ENST00000624831 2501 ntBASIC12.7□□□□□ -0.38
ATF1P18846 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 AC125807.2-201ENST00000513358 3514 ntBASIC12.7□□□□□ -0.38
ATF1P18846 AC005014.1-201ENST00000432006 2976 ntBASIC12.7□□□□□ -0.38
ATF1P18846 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.7□□□□□ -0.38
ATF1P18846 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms