Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TOP1P11387 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.95■□□□□ 0.3
TOP1P11387 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TOP1P11387 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.95■□□□□ 0.3
TOP1P11387 AL133466.1-201ENST00000447582 150 ntBASIC16.95■□□□□ 0.3
TOP1P11387 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.95■□□□□ 0.3
TOP1P11387 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.95■□□□□ 0.3
TOP1P11387 CHMP4BP1-201ENST00000556017 588 ntBASIC16.95■□□□□ 0.3
TOP1P11387 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.95■□□□□ 0.3
TOP1P11387 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.95■□□□□ 0.3
TOP1P11387 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.95■□□□□ 0.3
TOP1P11387 MIR3188-201ENST00000583494 85 ntBASIC16.95■□□□□ 0.3
TOP1P11387 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.95■□□□□ 0.3
TOP1P11387 AC091812.3-201ENST00000621362 345 ntBASIC16.95■□□□□ 0.3
TOP1P11387 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.95■□□□□ 0.3
TOP1P11387 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TOP1P11387 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.95■□□□□ 0.3
TOP1P11387 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 AC064801.2-201ENST00000625052 1303 ntBASIC16.95■□□□□ 0.3
TOP1P11387 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.94■□□□□ 0.3
TOP1P11387 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
TOP1P11387 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TOP1P11387 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 AL928921.2-201ENST00000641325 2442 ntBASIC16.94■□□□□ 0.3
TOP1P11387 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.94■□□□□ 0.3
TOP1P11387 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.94■□□□□ 0.3
TOP1P11387 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 TSPY25P-201ENST00000429463 745 ntBASIC16.94■□□□□ 0.3
TOP1P11387 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.94■□□□□ 0.3
TOP1P11387 RN7SL574P-201ENST00000581512 297 ntBASIC16.94■□□□□ 0.3
TOP1P11387 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.94■□□□□ 0.3
TOP1P11387 AC097724.1-201ENST00000609581 426 ntBASIC16.94■□□□□ 0.3
TOP1P11387 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.94■□□□□ 0.3
TOP1P11387 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.94■□□□□ 0.3
TOP1P11387 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.94■□□□□ 0.3
TOP1P11387 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TOP1P11387 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TOP1P11387 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.94■□□□□ 0.3
TOP1P11387 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.93■□□□□ 0.3
TOP1P11387 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.93■□□□□ 0.3
TOP1P11387 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TOP1P11387 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.93■□□□□ 0.3
TOP1P11387 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.93■□□□□ 0.3
TOP1P11387 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.93■□□□□ 0.3
TOP1P11387 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.93■□□□□ 0.3
TOP1P11387 NUP210P1-202ENST00000504322 710 ntBASIC16.93■□□□□ 0.3
TOP1P11387 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TOP1P11387 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.93■□□□□ 0.3
TOP1P11387 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.93■□□□□ 0.3
TOP1P11387 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.93■□□□□ 0.3
TOP1P11387 AC021016.3-201ENST00000608367 477 ntBASIC16.93■□□□□ 0.3
TOP1P11387 AC104506.1-201ENST00000609247 429 ntBASIC16.93■□□□□ 0.3
TOP1P11387 AL591471.1-201ENST00000621855 229 ntBASIC16.93■□□□□ 0.3
TOP1P11387 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.93■□□□□ 0.3
TOP1P11387 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.93■□□□□ 0.3
TOP1P11387 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.93■□□□□ 0.3
TOP1P11387 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TOP1P11387 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TOP1P11387 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms