Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.32□□□□□ -0.28
THBS1P07996 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
THBS1P07996 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 AC130686.1-201ENST00000622936 2466 ntBASIC13.32□□□□□ -0.28
THBS1P07996 AC244394.1-201ENST00000435000 1665 ntBASIC13.32□□□□□ -0.28
THBS1P07996 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 MIR1908-201ENST00000410394 80 ntBASIC13.32□□□□□ -0.28
THBS1P07996 AC099336.1-201ENST00000417053 1171 ntBASIC13.32□□□□□ -0.28
THBS1P07996 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.32□□□□□ -0.28
THBS1P07996 AC026954.1-201ENST00000429771 1293 ntBASIC13.32□□□□□ -0.28
THBS1P07996 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 CTBP2P5-201ENST00000454986 1264 ntBASIC13.32□□□□□ -0.28
THBS1P07996 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 AC100850.1-201ENST00000506768 649 ntBASIC13.32□□□□□ -0.28
THBS1P07996 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.32□□□□□ -0.28
THBS1P07996 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.32□□□□□ -0.28
THBS1P07996 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
THBS1P07996 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 AC009884.2-201ENST00000603110 324 ntBASIC13.32□□□□□ -0.28
THBS1P07996 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
THBS1P07996 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 AC089987.1-201ENST00000551654 2209 ntBASIC13.32□□□□□ -0.28
THBS1P07996 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
THBS1P07996 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.32□□□□□ -0.28
THBS1P07996 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.32□□□□□ -0.28
THBS1P07996 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THBS1P07996 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
THBS1P07996 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
THBS1P07996 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
THBS1P07996 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 AL023775.1-201ENST00000454907 1746 ntBASIC13.31□□□□□ -0.28
THBS1P07996 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS1P07996 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 AC111170.3-201ENST00000624282 2464 ntBASIC13.31□□□□□ -0.28
THBS1P07996 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
THBS1P07996 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 AC138969.2-201ENST00000532739 9932 ntBASIC13.31□□□□□ -0.28
THBS1P07996 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.31□□□□□ -0.28
THBS1P07996 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
THBS1P07996 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
THBS1P07996 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS1P07996 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 AC012441.2-201ENST00000444843 739 ntBASIC13.31□□□□□ -0.28
THBS1P07996 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
THBS1P07996 MIR4525-201ENST00000580000 75 ntBASIC13.31□□□□□ -0.28
THBS1P07996 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.31□□□□□ -0.28
THBS1P07996 AC244157.2-201ENST00000616239 1006 ntBASIC13.31□□□□□ -0.28
THBS1P07996 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
THBS1P07996 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
THBS1P07996 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
THBS1P07996 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
THBS1P07996 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS1P07996 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.31□□□□□ -0.28
THBS1P07996 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS1P07996 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS1P07996 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms