Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 AL591163.1-201ENST00000641757 987 ntBASIC13.25□□□□□ -0.29
HIST1H2ABP04908 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H2ABP04908 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AC027612.1-201ENST00000445234 2395 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AC009093.10-201ENST00000641956 1442 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AC009093.2-202ENST00000620513 2079 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AC112492.5-201ENST00000421897 457 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 KRT17P7-201ENST00000451704 1104 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 USP32P1-208ENST00000506594 1164 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 RN7SL713P-201ENST00000582127 302 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AC008825.2-201ENST00000603374 718 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AL356585.2-201ENST00000625078 2396 ntBASIC13.24□□□□□ -0.29
HIST1H2ABP04908 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H2ABP04908 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H2ABP04908 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms