Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 AL139158.3-201ENST00000641212 1562 ntBASIC8.59□□□□□ -1.03
APOBP04114 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
APOBP04114 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
APOBP04114 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 AC009132.1-201ENST00000565194 320 ntBASIC8.59□□□□□ -1.03
APOBP04114 AC112702.1-201ENST00000623712 366 ntBASIC8.59□□□□□ -1.03
APOBP04114 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 SFPQP1-201ENST00000446621 1786 ntBASIC8.59□□□□□ -1.03
APOBP04114 GPI-205ENST00000586425 1799 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 AL031577.1-201ENST00000339867 399 ntBASIC8.59□□□□□ -1.03
APOBP04114 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 TPT1P11-201ENST00000458482 498 ntBASIC8.59□□□□□ -1.03
APOBP04114 AC007622.1-201ENST00000488371 535 ntBASIC8.59□□□□□ -1.03
APOBP04114 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC8.59□□□□□ -1.03
APOBP04114 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC8.59□□□□□ -1.03
APOBP04114 MIR7704-201ENST00000610524 59 ntBASIC8.59□□□□□ -1.03
APOBP04114 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
APOBP04114 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
APOBP04114 AGAP7P-201ENST00000582299 2062 ntBASIC8.59□□□□□ -1.03
APOBP04114 AGAP14-201ENST00000624701 2060 ntBASIC8.59□□□□□ -1.03
APOBP04114 AC020763.4-201ENST00000623414 4170 ntBASIC8.59□□□□□ -1.03
APOBP04114 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC8.59□□□□□ -1.03
APOBP04114 HDGF-202ENST00000368206 960 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 RN7SL838P-201ENST00000481676 295 ntBASIC8.59□□□□□ -1.03
APOBP04114 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
APOBP04114 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 AL031768.1-201ENST00000606542 701 ntBASIC8.59□□□□□ -1.03
APOBP04114 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC8.59□□□□□ -1.03
APOBP04114 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC8.59□□□□□ -1.03
APOBP04114 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
APOBP04114 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC8.59□□□□□ -1.04
APOBP04114 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
APOBP04114 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
APOBP04114 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC8.58□□□□□ -1.04
APOBP04114 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC8.58□□□□□ -1.04
APOBP04114 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
APOBP04114 AC092865.2-201ENST00000439409 971 ntBASIC8.58□□□□□ -1.04
APOBP04114 RN7SL477P-201ENST00000488440 286 ntBASIC8.58□□□□□ -1.04
APOBP04114 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC8.58□□□□□ -1.04
APOBP04114 NAT9-204ENST00000578822 839 ntTSL 3 BASIC8.58□□□□□ -1.04
APOBP04114 AC009779.7-201ENST00000609031 469 ntBASIC8.58□□□□□ -1.04
APOBP04114 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC8.58□□□□□ -1.04
APOBP04114 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
APOBP04114 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC8.58□□□□□ -1.04
APOBP04114 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
APOBP04114 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC8.58□□□□□ -1.04
APOBP04114 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC8.58□□□□□ -1.04
APOBP04114 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC8.58□□□□□ -1.04
APOBP04114 SRP9P1-201ENST00000445874 261 ntBASIC8.58□□□□□ -1.04
APOBP04114 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC8.58□□□□□ -1.04
APOBP04114 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC8.58□□□□□ -1.04
APOBP04114 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC8.58□□□□□ -1.04
APOBP04114 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC8.58□□□□□ -1.04
APOBP04114 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 FAM223B-202ENST00000598177 713 ntBASIC8.58□□□□□ -1.04
APOBP04114 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
APOBP04114 AL078624.1-201ENST00000604004 547 ntBASIC8.58□□□□□ -1.04
APOBP04114 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 FAM223A-202ENST00000625204 713 ntBASIC8.58□□□□□ -1.04
APOBP04114 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC8.58□□□□□ -1.04
APOBP04114 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
APOBP04114 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms