Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.16■□□□□ 0.02
APOEP02649 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 GPAA1P2-201ENST00000417923 928 ntBASIC15.16■□□□□ 0.02
APOEP02649 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.16■□□□□ 0.02
APOEP02649 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.16■□□□□ 0.02
APOEP02649 AC006122.1-201ENST00000493323 440 ntBASIC15.16■□□□□ 0.02
APOEP02649 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.16■□□□□ 0.02
APOEP02649 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.16■□□□□ 0.02
APOEP02649 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.16■□□□□ 0.02
APOEP02649 AL160314.3-201ENST00000556041 767 ntBASIC15.16■□□□□ 0.02
APOEP02649 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.16■□□□□ 0.02
APOEP02649 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.16■□□□□ 0.02
APOEP02649 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.16■□□□□ 0.02
APOEP02649 AL451050.2-201ENST00000606967 682 ntBASIC15.16■□□□□ 0.02
APOEP02649 AC090164.2-201ENST00000611487 516 ntBASIC15.16■□□□□ 0.02
APOEP02649 AC138649.2-201ENST00000615886 705 ntBASIC15.16■□□□□ 0.02
APOEP02649 AC133540.1-201ENST00000620845 1019 ntBASIC15.16■□□□□ 0.02
APOEP02649 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
APOEP02649 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.16■□□□□ 0.02
APOEP02649 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
APOEP02649 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.16■□□□□ 0.02
APOEP02649 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
APOEP02649 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
APOEP02649 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOEP02649 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
APOEP02649 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
APOEP02649 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
APOEP02649 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
APOEP02649 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
APOEP02649 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
APOEP02649 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
APOEP02649 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.15■□□□□ 0.02
APOEP02649 DPM3-202ENST00000368399 517 ntBASIC15.15■□□□□ 0.02
APOEP02649 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.15■□□□□ 0.02
APOEP02649 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.15■□□□□ 0.02
APOEP02649 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.15■□□□□ 0.02
APOEP02649 NKAIN1P1-201ENST00000435754 582 ntBASIC15.15■□□□□ 0.02
APOEP02649 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
APOEP02649 EIF4HP1-201ENST00000453115 687 ntBASIC15.15■□□□□ 0.02
APOEP02649 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.15■□□□□ 0.02
APOEP02649 SORD2P-201ENST00000558556 1069 ntBASIC15.15■□□□□ 0.02
APOEP02649 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.15■□□□□ 0.02
APOEP02649 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 AC244093.1-201ENST00000610837 814 ntBASIC15.15■□□□□ 0.02
APOEP02649 MIR6074-201ENST00000612054 107 ntBASIC15.15■□□□□ 0.02
APOEP02649 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.15■□□□□ 0.02
APOEP02649 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.15■□□□□ 0.02
APOEP02649 GPR182-203ENST00000622922 591 ntBASIC15.15■□□□□ 0.02
APOEP02649 AC068587.8-201ENST00000641239 219 ntBASIC15.15■□□□□ 0.02
APOEP02649 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.15■□□□□ 0.02
APOEP02649 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.15■□□□□ 0.02
APOEP02649 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 AC144522.1-201ENST00000625111 1658 ntBASIC15.15■□□□□ 0.02
APOEP02649 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOEP02649 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.14■□□□□ 0.01
APOEP02649 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.14■□□□□ 0.01
APOEP02649 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
APOEP02649 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.14■□□□□ 0.01
APOEP02649 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
APOEP02649 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.14■□□□□ 0.01
APOEP02649 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOEP02649 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.14■□□□□ 0.01
APOEP02649 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
APOEP02649 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms